BLASTX nr result

ID: Glycyrrhiza24_contig00027355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027355
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07

>ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic-like [Glycine max]
          Length = 893

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
 Frame = +3

Query: 99  EKFNRKDGFEDDVAFKVDEEFVHKEGSSMR---NGKVRGKATKGFKKNGHDGKERSLDVK 269
           +K  + +  +++   + DE  V+KEG S R   NGKVR  ATKGF        +   DVK
Sbjct: 118 QKHKKTENGDNNKIDREDEVGVYKEGCSTRSNNNGKVRRTATKGFTSENDGNLD---DVK 174

Query: 270 EKQRH-GANVRQDGRLKRQGHGLELESDDCSVIKSQG 377
            KQ+  GANVRQ+G LKR+   LE ES D S I   G
Sbjct: 175 AKQKKSGANVRQNGPLKRRSRSLEPESYDGSEIGKSG 211


Top