BLASTX nr result

ID: Glycyrrhiza24_contig00027319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027319
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614030.1| Pentatricopeptide repeat-containing protein ...   169   3e-40
ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containi...   162   2e-38
ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinu...   152   2e-35
ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloproteas...   149   2e-34
emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]   149   2e-34

>ref|XP_003614030.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515365|gb|AES96988.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  169 bits (427), Expect = 3e-40
 Identities = 82/93 (88%), Positives = 86/93 (92%)
 Frame = +3

Query: 3   MVDILGRAGLLREAYGFIQNMPFEPDPIVWRTLLSACTVHDVHDRTGIGDEVRKRLLRME 182
           MVD+LGRAG L EAY FIQ+MPF PDPIVWRTLLSACTVHDV DRTGIGD+VRKRLL ME
Sbjct: 358 MVDVLGRAGHLGEAYRFIQSMPFAPDPIVWRTLLSACTVHDVCDRTGIGDKVRKRLLEME 417

Query: 183 PRRGGNLVIVANMYAEVGKWEKAANVRRVMRDG 281
           P+RGGNLVIVANMYAEVG WEKAANVRRVMRDG
Sbjct: 418 PKRGGNLVIVANMYAEVGNWEKAANVRRVMRDG 450


>ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Glycine max]
          Length = 505

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/93 (82%), Positives = 83/93 (89%)
 Frame = +3

Query: 3   MVDILGRAGLLREAYGFIQNMPFEPDPIVWRTLLSACTVHDVHDRTGIGDEVRKRLLRME 182
           MVD+LGRAG L EAY FIQ+MP EPDP+VWRTLLSACTVHDVHD TGIG+ V K+LL  E
Sbjct: 365 MVDVLGRAGRLEEAYEFIQSMPIEPDPVVWRTLLSACTVHDVHDHTGIGERVSKKLLLKE 424

Query: 183 PRRGGNLVIVANMYAEVGKWEKAANVRRVMRDG 281
           PRRGGNLVIVANMYAEVG WE+AANVRRVMRDG
Sbjct: 425 PRRGGNLVIVANMYAEVGMWEEAANVRRVMRDG 457


>ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
            gi|223528509|gb|EEF30537.1| Cell division protein ftsH,
            putative [Ricinus communis]
          Length = 1157

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/93 (76%), Positives = 80/93 (86%)
 Frame = +3

Query: 3    MVDILGRAGLLREAYGFIQNMPFEPDPIVWRTLLSACTVHDVHDRTGIGDEVRKRLLRME 182
            MVDILGRAGLL+EAY FI  MPF+PDPIVWRTLLSAC++HDV D TG+  +VRKRLL +E
Sbjct: 1009 MVDILGRAGLLKEAYNFITKMPFQPDPIVWRTLLSACSIHDVKDSTGVAYKVRKRLLELE 1068

Query: 183  PRRGGNLVIVANMYAEVGKWEKAANVRRVMRDG 281
            PRR GN V+VANMYA+ G WEKAA VRRVMRDG
Sbjct: 1069 PRRSGNFVMVANMYADAGMWEKAAKVRRVMRDG 1101


>ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
            chloroplastic-like [Vitis vinifera]
          Length = 1146

 Score =  149 bits (376), Expect = 2e-34
 Identities = 68/92 (73%), Positives = 79/92 (85%)
 Frame = +3

Query: 3    MVDILGRAGLLREAYGFIQNMPFEPDPIVWRTLLSACTVHDVHDRTGIGDEVRKRLLRME 182
            MVDIL RAG L+EAY FI NMP E DP+VWRTLLSACT+H ++D  G+GD+VRKRLL +E
Sbjct: 1004 MVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLELE 1063

Query: 183  PRRGGNLVIVANMYAEVGKWEKAANVRRVMRD 278
            PRR GN V+VANMYAEVGKW+KAANVRR M+D
Sbjct: 1064 PRRSGNFVMVANMYAEVGKWDKAANVRRTMKD 1095


>emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
          Length = 505

 Score =  149 bits (376), Expect = 2e-34
 Identities = 68/92 (73%), Positives = 79/92 (85%)
 Frame = +3

Query: 3   MVDILGRAGLLREAYGFIQNMPFEPDPIVWRTLLSACTVHDVHDRTGIGDEVRKRLLRME 182
           MVDIL RAG L+EAY FI NMP E DP+VWRTLLSACT+H ++D  G+GD+VRKRLL +E
Sbjct: 363 MVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLELE 422

Query: 183 PRRGGNLVIVANMYAEVGKWEKAANVRRVMRD 278
           PRR GN V+VANMYAEVGKW+KAANVRR M+D
Sbjct: 423 PRRSGNFVMVANMYAEVGKWDKAANVRRTMKD 454


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