BLASTX nr result

ID: Glycyrrhiza24_contig00027304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027304
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612797.1| Cellulose synthase-like protein [Medicago tr...   144   7e-33
ref|XP_003517664.1| PREDICTED: cellulose synthase-like protein D...   139   2e-31
ref|XP_003602227.1| Cellulose synthase-like protein [Medicago tr...   125   4e-27
ref|XP_002882269.1| hypothetical protein ARALYDRAFT_477551 [Arab...   122   2e-26
ref|NP_186955.1| cellulose synthase-like protein D3 [Arabidopsis...   122   2e-26

>ref|XP_003612797.1| Cellulose synthase-like protein [Medicago truncatula]
            gi|355514132|gb|AES95755.1| Cellulose synthase-like
            protein [Medicago truncatula]
          Length = 1121

 Score =  144 bits (363), Expect = 7e-33
 Identities = 76/105 (72%), Positives = 83/105 (79%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1    ALYGFDPPREKEEA-GRKNKKXXXXXXXXXXXXGEDQSLRSGGSIDDEEMSTALIPKKFG 177
            ALYGFDPPR +EEA G    K             EDQSLR+GGSID+EE+S+ALIPKKFG
Sbjct: 688  ALYGFDPPRVQEEATGWFGSKKKNSSTVASVPDVEDQSLRNGGSIDEEELSSALIPKKFG 747

Query: 178  NSSLLVDSVRVAEFQGRPLADHSSIKNGRPPGALTLPRDLLDAAT 312
            NS+L VDS+RVAEFQGRPLADH SIKNGR PGALTLPRDLLDAAT
Sbjct: 748  NSTLFVDSIRVAEFQGRPLADHPSIKNGRQPGALTLPRDLLDAAT 792


>ref|XP_003517664.1| PREDICTED: cellulose synthase-like protein D3-like [Glycine max]
          Length = 1118

 Score =  139 bits (351), Expect = 2e-31
 Identities = 78/107 (72%), Positives = 85/107 (79%), Gaps = 3/107 (2%)
 Frame = +1

Query: 1   ALYGFDPPREKEEAG---RKNKKXXXXXXXXXXXXGEDQSLRSGGSIDDEEMSTALIPKK 171
           ALYGFDPPR KEE+G   RKNKK             E+QSLR+G  I+DEEM++AL+PKK
Sbjct: 685 ALYGFDPPRIKEESGWFGRKNKKSSTVASVSEAS-AEEQSLRNG-RIEDEEMTSALVPKK 742

Query: 172 FGNSSLLVDSVRVAEFQGRPLADHSSIKNGRPPGALTLPRDLLDAAT 312
           FGNSSLLVDSVRVAEFQG PLADHSSIK GRPPGALTLPRD LDAAT
Sbjct: 743 FGNSSLLVDSVRVAEFQGLPLADHSSIKYGRPPGALTLPRDPLDAAT 789


>ref|XP_003602227.1| Cellulose synthase-like protein [Medicago truncatula]
           gi|355491275|gb|AES72478.1| Cellulose synthase-like
           protein [Medicago truncatula]
          Length = 524

 Score =  125 bits (314), Expect = 4e-27
 Identities = 68/108 (62%), Positives = 77/108 (71%), Gaps = 4/108 (3%)
 Frame = +1

Query: 1   ALYGFDPPREKEEAGR----KNKKXXXXXXXXXXXXGEDQSLRSGGSIDDEEMSTALIPK 168
           A+YGF+PP+ +EEA      K K              EDQ LR GGSIDDEEMS ALIPK
Sbjct: 375 AIYGFNPPQVQEEATSWFCSKKKNSLTVSSVPEVDSLEDQPLRRGGSIDDEEMSNALIPK 434

Query: 169 KFGNSSLLVDSVRVAEFQGRPLADHSSIKNGRPPGALTLPRDLLDAAT 312
           KFGNS++ VDS+RVAEF+GRPLADH SIKNGR PG LT PRD +DAAT
Sbjct: 435 KFGNSTVFVDSIRVAEFRGRPLADHPSIKNGRQPGTLTSPRD-IDAAT 481


>ref|XP_002882269.1| hypothetical protein ARALYDRAFT_477551 [Arabidopsis lyrata subsp.
            lyrata] gi|297328109|gb|EFH58528.1| hypothetical protein
            ARALYDRAFT_477551 [Arabidopsis lyrata subsp. lyrata]
          Length = 1145

 Score =  122 bits (307), Expect = 2e-26
 Identities = 66/113 (58%), Positives = 80/113 (70%), Gaps = 9/113 (7%)
 Frame = +1

Query: 1    ALYGFDPPREKEEA--------GRKNKKXXXXXXXXXXXXGEDQSLRSGG-SIDDEEMST 153
            ALYGFDPPR KE           RK KK             E++SLR GG S DDEEM+ 
Sbjct: 712  ALYGFDPPRAKEHHPGFCSCCFSRKKKKSRVPE--------ENRSLRMGGDSDDDEEMNL 763

Query: 154  ALIPKKFGNSSLLVDSVRVAEFQGRPLADHSSIKNGRPPGALTLPRDLLDAAT 312
            +L+PKKFGNS+ L+DS+ VAEFQGRPLADH +++NGRPPGALT+PR+LLDA+T
Sbjct: 764  SLVPKKFGNSTFLIDSIPVAEFQGRPLADHPAVQNGRPPGALTIPRELLDAST 816


>ref|NP_186955.1| cellulose synthase-like protein D3 [Arabidopsis thaliana]
            gi|75191265|sp|Q9M9M4.1|CSLD3_ARATH RecName:
            Full=Cellulose synthase-like protein D3; Short=AtCslD3;
            AltName: Full=Protein KOJAK
            gi|6714431|gb|AAF26119.1|AC012328_22 putative cellulose
            synthase catalytic subunit [Arabidopsis thaliana]
            gi|12619788|gb|AAG60543.1|AF232907_1 cellulose
            synthase-like CSLD3 [Arabidopsis thaliana]
            gi|13430536|gb|AAK25890.1|AF360180_1 putative cellulose
            synthase catalytic subunit [Arabidopsis thaliana]
            gi|14532744|gb|AAK64073.1| putative cellulose synthase
            catalytic subunit [Arabidopsis thaliana]
            gi|25136916|emb|CAC82909.1| cellulose synthase-like
            protein [Arabidopsis thaliana]
            gi|332640375|gb|AEE73896.1| cellulose synthase-like
            protein D3 [Arabidopsis thaliana]
          Length = 1145

 Score =  122 bits (307), Expect = 2e-26
 Identities = 66/113 (58%), Positives = 80/113 (70%), Gaps = 9/113 (7%)
 Frame = +1

Query: 1    ALYGFDPPREKEEA--------GRKNKKXXXXXXXXXXXXGEDQSLRSGG-SIDDEEMST 153
            ALYGFDPPR KE           RK KK             E++SLR GG S DDEEM+ 
Sbjct: 712  ALYGFDPPRAKEHHPGFCSCCFSRKKKKSRVPE--------ENRSLRMGGDSDDDEEMNL 763

Query: 154  ALIPKKFGNSSLLVDSVRVAEFQGRPLADHSSIKNGRPPGALTLPRDLLDAAT 312
            +L+PKKFGNS+ L+DS+ VAEFQGRPLADH +++NGRPPGALT+PR+LLDA+T
Sbjct: 764  SLVPKKFGNSTFLIDSIPVAEFQGRPLADHPAVQNGRPPGALTIPRELLDAST 816


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