BLASTX nr result

ID: Glycyrrhiza24_contig00027298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027298
         (826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containin...   275   9e-72
ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containin...   200   4e-49
ref|XP_002514115.1| nucleic acid binding protein, putative [Rici...   192   6e-47
ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containin...   191   2e-46
emb|CBI27906.3| unnamed protein product [Vitis vinifera]              191   2e-46

>ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Glycine max]
          Length = 601

 Score =  275 bits (703), Expect = 9e-72
 Identities = 130/149 (87%), Positives = 140/149 (93%)
 Frame = +1

Query: 1   KRYCKNQEKEVIFFEWASIRGTHANLQAIPIPSSKAVMVEKAFNLAAQKLGFEFVAKKFD 180
           K YCK+QEKEVIFFEW S+RGTHAN+QAIPIPSSKA+M EK FNLAAQKLGFEFV KKFD
Sbjct: 453 KSYCKSQEKEVIFFEWVSVRGTHANIQAIPIPSSKAIMAEKIFNLAAQKLGFEFVTKKFD 512

Query: 181 SISDGRKFLKTQIDGNLSLFYAEVPGGTILLHHVEEKERFPAQFGREVMAGLLNMADNAD 360
           SIS+GRKFLK QIDG+ SLFYA++PGGTILLHHVEEKE+FPAQFGREV+AGLLNMADNAD
Sbjct: 513 SISEGRKFLKAQIDGDSSLFYAQIPGGTILLHHVEEKEKFPAQFGREVLAGLLNMADNAD 572

Query: 361 WRNCKHSKDEEMKIVEDFKSRFQEYDPNC 447
           WRN KHSKDEEMKIVE FKSRFQEYDPNC
Sbjct: 573 WRNRKHSKDEEMKIVEVFKSRFQEYDPNC 601


>ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Cucumis sativus] gi|449489882|ref|XP_004158448.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           64-like [Cucumis sativus]
          Length = 606

 Score =  200 bits (508), Expect = 4e-49
 Identities = 94/148 (63%), Positives = 117/148 (79%)
 Frame = +1

Query: 1   KRYCKNQEKEVIFFEWASIRGTHANLQAIPIPSSKAVMVEKAFNLAAQKLGFEFVAKKFD 180
           ++Y K+Q KEV+FFEW S R THANLQA+PIPSS+A +V+  F++AA+KLGF+FV  K D
Sbjct: 458 RKYFKSQGKEVVFFEWVSKRSTHANLQAVPIPSSRAHVVQNIFDMAAEKLGFKFVISKSD 517

Query: 181 SISDGRKFLKTQIDGNLSLFYAEVPGGTILLHHVEEKERFPAQFGREVMAGLLNMADNAD 360
           + S+GRK L+TQ D + S FYAE+P    L H +EE E FPAQFGREV+AGLLNMAD AD
Sbjct: 518 APSEGRKSLRTQFDSDHSFFYAELPECVTLSHVIEENEIFPAQFGREVLAGLLNMADKAD 577

Query: 361 WRNCKHSKDEEMKIVEDFKSRFQEYDPN 444
           WRNC HSK+EE K+ EDFK RF+ +DPN
Sbjct: 578 WRNCAHSKEEETKMAEDFKIRFENFDPN 605


>ref|XP_002514115.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223546571|gb|EEF48069.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 606

 Score =  192 bits (489), Expect = 6e-47
 Identities = 89/147 (60%), Positives = 113/147 (76%)
 Frame = +1

Query: 1   KRYCKNQEKEVIFFEWASIRGTHANLQAIPIPSSKAVMVEKAFNLAAQKLGFEFVAKKFD 180
           K Y   Q KE I FEWAS RGTHANLQA+P+PSS+A  V+  FN+AA+KLGF+FV  KF+
Sbjct: 458 KLYYNKQGKETILFEWASKRGTHANLQAVPVPSSRAAAVQDIFNMAAEKLGFKFVTMKFN 517

Query: 181 SISDGRKFLKTQIDGNLSLFYAEVPGGTILLHHVEEKERFPAQFGREVMAGLLNMADNAD 360
           + SDGRK+L+TQ D N S FY E+P GT+L H V+E E FPAQFGREV+AGLLNM + AD
Sbjct: 518 NNSDGRKWLRTQFDRNYSFFYVELPDGTVLSHSVKENESFPAQFGREVLAGLLNMPERAD 577

Query: 361 WRNCKHSKDEEMKIVEDFKSRFQEYDP 441
           WR C  SK+EE K++++ K +F+E +P
Sbjct: 578 WRTCTLSKEEETKMIDELKKQFEELNP 604


>ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Vitis vinifera]
          Length = 607

 Score =  191 bits (485), Expect = 2e-46
 Identities = 88/147 (59%), Positives = 114/147 (77%)
 Frame = +1

Query: 1   KRYCKNQEKEVIFFEWASIRGTHANLQAIPIPSSKAVMVEKAFNLAAQKLGFEFVAKKFD 180
           K Y + Q KEV+FFEW   RGTHAN+QA+PIP S+A  V+  F LAA+KLGF+FV  K +
Sbjct: 459 KMYFRTQGKEVVFFEWIFKRGTHANIQAVPIPLSRASAVKNIFILAAEKLGFQFVTTKSN 518

Query: 181 SISDGRKFLKTQIDGNLSLFYAEVPGGTILLHHVEEKERFPAQFGREVMAGLLNMADNAD 360
           + S+GRK L+ Q D  +S FY E+P GTIL H +E+ E+FP QFGREV+AGLLNMAD AD
Sbjct: 519 NDSEGRKSLRAQFDDKISFFYVELPDGTILSHAIEDNEKFPVQFGREVLAGLLNMADRAD 578

Query: 361 WRNCKHSKDEEMKIVEDFKSRFQEYDP 441
           WRNCK SK++EMK+ E FK++F+++DP
Sbjct: 579 WRNCKQSKEDEMKMAEVFKNQFKKFDP 605


>emb|CBI27906.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  191 bits (485), Expect = 2e-46
 Identities = 88/147 (59%), Positives = 114/147 (77%)
 Frame = +1

Query: 1   KRYCKNQEKEVIFFEWASIRGTHANLQAIPIPSSKAVMVEKAFNLAAQKLGFEFVAKKFD 180
           K Y + Q KEV+FFEW   RGTHAN+QA+PIP S+A  V+  F LAA+KLGF+FV  K +
Sbjct: 445 KMYFRTQGKEVVFFEWIFKRGTHANIQAVPIPLSRASAVKNIFILAAEKLGFQFVTTKSN 504

Query: 181 SISDGRKFLKTQIDGNLSLFYAEVPGGTILLHHVEEKERFPAQFGREVMAGLLNMADNAD 360
           + S+GRK L+ Q D  +S FY E+P GTIL H +E+ E+FP QFGREV+AGLLNMAD AD
Sbjct: 505 NDSEGRKSLRAQFDDKISFFYVELPDGTILSHAIEDNEKFPVQFGREVLAGLLNMADRAD 564

Query: 361 WRNCKHSKDEEMKIVEDFKSRFQEYDP 441
           WRNCK SK++EMK+ E FK++F+++DP
Sbjct: 565 WRNCKQSKEDEMKMAEVFKNQFKKFDP 591


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