BLASTX nr result

ID: Glycyrrhiza24_contig00027286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027286
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611329.1| Cyclin-like F-box [Medicago truncatula] gi|3...    62   4e-08
ref|XP_003625386.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    61   8e-08
ref|XP_003625378.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    55   8e-06

>ref|XP_003611329.1| Cyclin-like F-box [Medicago truncatula] gi|355512664|gb|AES94287.1|
           Cyclin-like F-box [Medicago truncatula]
          Length = 318

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
 Frame = +3

Query: 3   LTLDFDGETSAGFL---HFVCSILLSRDPTLPVHSLHLKLRNSYCDQYDIKRFVHFATQR 173
           LTLDFD + S  FL   HFV  ++L RD +LP+ S   +     CD YDI RF+  A +R
Sbjct: 29  LTLDFDDQGSPNFLAFRHFVYLVMLMRDASLPIRSFLQR-----CDPYDINRFISVAVKR 83

Query: 174 GIKNLTIDL 200
           GI NLT+DL
Sbjct: 84  GIDNLTLDL 92


>ref|XP_003625386.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500401|gb|AES81604.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 485

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
 Frame = +3

Query: 3   LTLDFDG---ETSAGFLHFVCSILLSRDPTLPVHSLHLKLRNSYCDQYDIKRFVHFATQR 173
           L LDFD    ETS  FL  V S +  RD TLP+HS   K R+ +C Q DI +FV+   QR
Sbjct: 60  LALDFDSGGIETSDLFLDGVHSTMYRRDITLPIHSFRFKSRD-FCIQNDINQFVYLVLQR 118

Query: 174 GIKNLTIDLFR 206
           GI+NL +DL++
Sbjct: 119 GIQNLCLDLYK 129


>ref|XP_003625378.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500393|gb|AES81596.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 476

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
 Frame = +3

Query: 3   LTLDFDG---ETSAGFLHFVCSILLSRDPTLPVHSLHLKLRNSYCDQYDIKRFVHFATQR 173
           L  DFD    +TS  FL  V S +  RD  LP+HS HLK R S+  Q D+ +FV+   QR
Sbjct: 58  LAFDFDSSRFKTSDLFLRVVYSTIYRRDIALPIHSFHLKSR-SWDIQKDVNQFVYLVGQR 116

Query: 174 GIKNLTIDL 200
           GI NL +DL
Sbjct: 117 GILNLCLDL 125


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