BLASTX nr result

ID: Glycyrrhiza24_contig00027277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027277
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597727.1| U3 small nucleolar RNA-associated protein-li...   114   1e-23
gb|AFK45442.1| unknown [Medicago truncatula]                          112   2e-23
gb|ACJ85598.1| unknown [Medicago truncatula]                          112   2e-23
ref|XP_003593289.1| U3 small nucleolar RNA-associated protein-li...   112   2e-23
ref|XP_003543133.1| PREDICTED: U3 small nucleolar RNA-associated...   109   3e-22

>ref|XP_003597727.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
           truncatula] gi|87240437|gb|ABD32295.1| WD40-like
           [Medicago truncatula] gi|217074444|gb|ACJ85582.1|
           unknown [Medicago truncatula]
           gi|355486775|gb|AES67978.1| U3 small nucleolar
           RNA-associated protein-like protein [Medicago
           truncatula] gi|388499470|gb|AFK37801.1| unknown
           [Medicago truncatula]
          Length = 555

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/61 (90%), Positives = 59/61 (96%)
 Frame = +1

Query: 46  ALQRKPVWVDEEEEKVTVSIAKVNRLRKLRKEEDENLISGSEYVSRLRAHHVKLNPGTDW 225
           AL++KPVWVDEEEEKVTV+IAKVNRLRKLRKEEDEN+ISGSEYVSRLRA HVKLN GTDW
Sbjct: 123 ALRKKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDENVISGSEYVSRLRAQHVKLNRGTDW 182

Query: 226 A 228
           A
Sbjct: 183 A 183


>gb|AFK45442.1| unknown [Medicago truncatula]
          Length = 555

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +1

Query: 46  ALQRKPVWVDEEEEKVTVSIAKVNRLRKLRKEEDENLISGSEYVSRLRAHHVKLNPGTDW 225
           AL+RKPVWVDEEEEKVTV+IAKVNRLRKLRKEEDE+LISGSEYVSRLRA H KLN GTDW
Sbjct: 123 ALKRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDEDLISGSEYVSRLRAQHAKLNRGTDW 182

Query: 226 A 228
           A
Sbjct: 183 A 183


>gb|ACJ85598.1| unknown [Medicago truncatula]
          Length = 555

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +1

Query: 46  ALQRKPVWVDEEEEKVTVSIAKVNRLRKLRKEEDENLISGSEYVSRLRAHHVKLNPGTDW 225
           AL+RKPVWVDEEEEKVTV+IAKVNRLRKLRKEEDE+LISGSEYVSRLRA H KLN GTDW
Sbjct: 123 ALKRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDEDLISGSEYVSRLRAQHAKLNRGTDW 182

Query: 226 A 228
           A
Sbjct: 183 A 183


>ref|XP_003593289.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
           truncatula] gi|355482337|gb|AES63540.1| U3 small
           nucleolar RNA-associated protein-like protein [Medicago
           truncatula]
          Length = 555

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +1

Query: 46  ALQRKPVWVDEEEEKVTVSIAKVNRLRKLRKEEDENLISGSEYVSRLRAHHVKLNPGTDW 225
           AL+RKPVWVDEEEEKVTV+IAKVNRLRKLRKEEDE+LISGSEYVSRLRA H KLN GTDW
Sbjct: 123 ALKRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDEDLISGSEYVSRLRAQHAKLNRGTDW 182

Query: 226 A 228
           A
Sbjct: 183 A 183


>ref|XP_003543133.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
           [Glycine max]
          Length = 551

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/61 (85%), Positives = 57/61 (93%)
 Frame = +1

Query: 46  ALQRKPVWVDEEEEKVTVSIAKVNRLRKLRKEEDENLISGSEYVSRLRAHHVKLNPGTDW 225
           ALQ+KPVWVD+EEE  TV+IAKVNRLRKLRK EDE+LISGSEYVSRLRA HVKLNPGT+W
Sbjct: 121 ALQKKPVWVDDEEENATVNIAKVNRLRKLRKGEDEDLISGSEYVSRLRAQHVKLNPGTEW 180

Query: 226 A 228
           A
Sbjct: 181 A 181


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