BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027256
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat...    85   7e-15
ref|XP_003595769.1| Pentatricopeptide repeat-containing protein ...    84   1e-14
ref|XP_002885074.1| pentatricopeptide repeat-containing protein ...    64   1e-08
ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat...    61   1e-07
ref|XP_003623741.1| hypothetical protein MTR_7g075210 [Medicago ...    60   2e-07

>ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Glycine max]
          Length = 481

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 48/82 (58%), Positives = 55/82 (67%)
 Frame = +3

Query: 48  TWNPNPKTSTPSSRFLGIIETGRFLHSHPEPETPPGAFIHNLLKFRRDKPTEQVERALNQ 227
           T++ N KTSTP           RF+HS P        FI NLLKFRRDKPTEQ+ RAL+Q
Sbjct: 18  TFSNNVKTSTP-----------RFVHSCP------ATFIQNLLKFRRDKPTEQLYRALDQ 60

Query: 228 CGIDPINDDLVLDVLQRHRSDW 293
           CG D +N DLVLDVL+RHRSDW
Sbjct: 61  CGFD-LNHDLVLDVLRRHRSDW 81


>ref|XP_003595769.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484817|gb|AES66020.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 497

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 50/90 (55%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
 Frame = +3

Query: 36  NTHATWNPNPKTSTPS--SRFLGIIE--TGRFLHSHPEPETPPGAFIHNLLKFRRDKPTE 203
           N+H     +P TS P+  S F       + RFLHSH +   P  +FI NLLKFRRDKPTE
Sbjct: 24  NSHNLVQQSPNTSEPTFPSSFPQNPRNSSSRFLHSHHD-SPPLASFIQNLLKFRRDKPTE 82

Query: 204 QVERALNQCGIDPINDDLVLDVLQRHRSDW 293
           Q+E+ALN  GI P N++LVL VLQRHRSDW
Sbjct: 83  QIEQALNLIGIHP-NNNLVLQVLQRHRSDW 111


>ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330914|gb|EFH61333.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 517

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
 Frame = +3

Query: 57  PNPKTSTPSSRF--LGIIETGRFLHSHPEPETPPGAF------IHNLLKFRRDKPTEQVE 212
           PN K +   SRF  LGI +   FLHS   P+  P  F      +HN++K  R    E++E
Sbjct: 32  PNHKNNITLSRFHLLGINQATHFLHSLAAPDKFPNGFNQSAVDVHNIIKHHRGSSPEEIE 91

Query: 213 RALNQCGIDPINDDLVLDVLQRHRSDW 293
           R L++CGI  + ++LV +V+ R+RSDW
Sbjct: 92  RILDKCGIQ-LTEELVFEVVNRNRSDW 117


>ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
           gi|449502917|ref|XP_004161779.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
          Length = 532

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = +3

Query: 138 PETPPGAFIHNLLKFRRDKPTEQVERALNQCGIDPINDDLVLDVLQRHRSDW 293
           P+ P   ++ N+L FRR KP E +ERAL+ C +  + DD VL VL+RHRSDW
Sbjct: 87  PDDPSAVYVQNVLYFRRHKPVEDIERALSLCDL-VLTDDFVLKVLRRHRSDW 137


>ref|XP_003623741.1| hypothetical protein MTR_7g075210 [Medicago truncatula]
           gi|355498756|gb|AES79959.1| hypothetical protein
           MTR_7g075210 [Medicago truncatula]
          Length = 292

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +3

Query: 162 IHNLLKFRRDKPTEQVERALNQCGIDPINDDLVLDVLQRHRSDW 293
           +H    FRRDKPTEQ+ERALN  GI P + +LVL++LQRHRSDW
Sbjct: 104 LHPTKIFRRDKPTEQIERALNLTGIHP-DSNLVLELLQRHRSDW 146