BLASTX nr result

ID: Glycyrrhiza24_contig00027251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027251
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527270.1| PREDICTED: lysine-specific histone demethyla...    97   2e-18
ref|XP_002316929.1| hypothetical protein POPTRDRAFT_568963 [Popu...    89   4e-16
ref|XP_002281860.2| PREDICTED: lysine-specific histone demethyla...    86   4e-15
emb|CBI20361.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_003600175.1| Lysine-specific histone demethylase-like pro...    85   7e-15

>ref|XP_003527270.1| PREDICTED: lysine-specific histone demethylase 1 homolog 2-like
           [Glycine max]
          Length = 743

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/69 (69%), Positives = 58/69 (84%)
 Frame = -3

Query: 262 PLQLYTIISREQVHQIQQIEGGDESRLSYLMKNLGLKLMGSNALYNAGNSLIACVAGSQK 83
           PLQLYTIISREQ  Q+Q++EGG+ES LS+L+K LGLKLMG NAL  AGN+LIA +A S+K
Sbjct: 674 PLQLYTIISREQAQQLQKVEGGNESLLSFLVKTLGLKLMGPNALLTAGNTLIASIAHSRK 733

Query: 82  TRGRNRIIT 56
            R RNR+IT
Sbjct: 734 GRWRNRVIT 742


>ref|XP_002316929.1| hypothetical protein POPTRDRAFT_568963 [Populus trichocarpa]
           gi|222859994|gb|EEE97541.1| hypothetical protein
           POPTRDRAFT_568963 [Populus trichocarpa]
          Length = 712

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/70 (58%), Positives = 55/70 (78%)
 Frame = -3

Query: 262 PLQLYTIISREQVHQIQQIEGGDESRLSYLMKNLGLKLMGSNALYNAGNSLIACVAGSQK 83
           PLQLYT++SREQ   +Q + GGD+ +LS+L +NLGLKLMG +AL N G+SLI+ +A S+K
Sbjct: 641 PLQLYTVLSREQAQSLQLVTGGDDCKLSHLSRNLGLKLMGPSALVNFGSSLISTIANSRK 700

Query: 82  TRGRNRIITG 53
            RGRNR+  G
Sbjct: 701 GRGRNRVTAG 710


>ref|XP_002281860.2| PREDICTED: lysine-specific histone demethylase 1 homolog 2-like
           [Vitis vinifera]
          Length = 755

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/67 (59%), Positives = 55/67 (82%)
 Frame = -3

Query: 262 PLQLYTIISREQVHQIQQIEGGDESRLSYLMKNLGLKLMGSNALYNAGNSLIACVAGSQK 83
           PLQLYT++SREQ HQ+Q I G DESRLS+L+K+LGLKLMG +++ + GNSL A +A +++
Sbjct: 679 PLQLYTMLSREQAHQVQLIAGEDESRLSFLLKDLGLKLMGPSSMGSIGNSLAATIASARR 738

Query: 82  TRGRNRI 62
            RGR R+
Sbjct: 739 GRGRYRV 745


>emb|CBI20361.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/67 (59%), Positives = 55/67 (82%)
 Frame = -3

Query: 262 PLQLYTIISREQVHQIQQIEGGDESRLSYLMKNLGLKLMGSNALYNAGNSLIACVAGSQK 83
           PLQLYT++SREQ HQ+Q I G DESRLS+L+K+LGLKLMG +++ + GNSL A +A +++
Sbjct: 591 PLQLYTMLSREQAHQVQLIAGEDESRLSFLLKDLGLKLMGPSSMGSIGNSLAATIASARR 650

Query: 82  TRGRNRI 62
            RGR R+
Sbjct: 651 GRGRYRV 657


>ref|XP_003600175.1| Lysine-specific histone demethylase-like protein [Medicago
           truncatula] gi|355489223|gb|AES70426.1| Lysine-specific
           histone demethylase-like protein [Medicago truncatula]
          Length = 748

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = -3

Query: 262 PLQLYTIISREQVHQIQQIEGGDESRLSYLMKNLGLKLMGSNALYNAGNSLIACVAGSQK 83
           PL++YTI+S EQV ++Q+I GGDE+ LSYL KNLGLKLMG +AL  AGN +IA VA S+K
Sbjct: 674 PLKVYTILSIEQVDRMQEITGGDETMLSYLTKNLGLKLMGLSALLIAGNDVIASVAASRK 733

Query: 82  TRGRNRII 59
            R RNR I
Sbjct: 734 GRSRNRKI 741


Top