BLASTX nr result
ID: Glycyrrhiza24_contig00027214
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00027214
(325 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containi... 182 2e-44
emb|CBI33742.3| unnamed protein product [Vitis vinifera] 166 2e-39
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi... 166 2e-39
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera] 162 2e-38
ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|2... 160 1e-37
>ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 182 bits (462), Expect = 2e-44
Identities = 83/107 (77%), Positives = 95/107 (88%)
Frame = +1
Query: 1 MYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEMRGVGVKPSHVT 180
MYCKCGSLEDARKVFD + G+DVVAWNSMIMGY +HGFS+EAL+LF EM +GVKPS +T
Sbjct: 300 MYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDIT 359
Query: 181 FIAPLTACGHSGLVSKGWEVFNLMKDEYGMEPKIEHFGCKVNLLGRA 321
F+A LTAC H+GLVSKGWEVF+ MKD YGMEPK+EH+GC VNLLGRA
Sbjct: 360 FVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRA 406
Score = 61.6 bits (148), Expect = 6e-08
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Frame = +1
Query: 4 YCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEM------RGVG-V 162
Y K G L +AR +F+ + +DVV WN MI GYA HG EAL F +M G G V
Sbjct: 193 YAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKV 252
Query: 163 KPSHVTFIAPLTACGHSGLVSKGWEVFNLMKDEYGMEPKIEHFGCKVNL 309
+P+ +T +A L++CG G + G V + +E+ G KVN+
Sbjct: 253 RPNEITVVAVLSSCGQVGALECGKWVHSY----------VENNGIKVNV 291
>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 166 bits (420), Expect = 2e-39
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +1
Query: 1 MYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEMRGVGVKPSHVT 180
MY KCGSLEDAR VFD+I +DVVAWNSMI+GYA+HGFS+EAL+LF M +G+ P+++T
Sbjct: 234 MYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNIT 293
Query: 181 FIAPLTACGHSGLVSKGWEVFNLMKDEYGMEPKIEHFGCKVNLLGRA 321
FI L+ACGHSG V++GW++FN MKDEYG+EPKIEH+GC VNLLGRA
Sbjct: 294 FIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRA 340
Score = 65.1 bits (157), Expect = 6e-09
Identities = 34/76 (44%), Positives = 43/76 (56%)
Frame = +1
Query: 4 YCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEMRGVGVKPSHVTF 183
Y K G L+ AR +FD + RD V WN MI GY +G EAL LF M KP+ VT
Sbjct: 134 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 193
Query: 184 IAPLTACGHSGLVSKG 231
++ L+ACG G + G
Sbjct: 194 LSVLSACGQLGALESG 209
>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 166 bits (420), Expect = 2e-39
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +1
Query: 1 MYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEMRGVGVKPSHVT 180
MY KCGSLEDAR VFD+I +DVVAWNSMI+GYA+HGFS+EAL+LF M +G+ P+++T
Sbjct: 300 MYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNIT 359
Query: 181 FIAPLTACGHSGLVSKGWEVFNLMKDEYGMEPKIEHFGCKVNLLGRA 321
FI L+ACGHSG V++GW++FN MKDEYG+EPKIEH+GC VNLLGRA
Sbjct: 360 FIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRA 406
Score = 65.1 bits (157), Expect = 6e-09
Identities = 34/76 (44%), Positives = 43/76 (56%)
Frame = +1
Query: 4 YCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEMRGVGVKPSHVTF 183
Y K G L+ AR +FD + RD V WN MI GY +G EAL LF M KP+ VT
Sbjct: 200 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 259
Query: 184 IAPLTACGHSGLVSKG 231
++ L+ACG G + G
Sbjct: 260 LSVLSACGQLGALESG 275
>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 162 bits (411), Expect = 2e-38
Identities = 74/107 (69%), Positives = 92/107 (85%)
Frame = +1
Query: 1 MYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEMRGVGVKPSHVT 180
MY KCGSLEDAR VFD+I +DVVAWNSMI+GYA+ GFS+EAL+LF M +G+ P+++T
Sbjct: 247 MYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNIT 306
Query: 181 FIAPLTACGHSGLVSKGWEVFNLMKDEYGMEPKIEHFGCKVNLLGRA 321
FI L+ACGHSG V++GW++FN MKDEYG+EPKIEH+GC VNLLGRA
Sbjct: 307 FIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRA 353
Score = 65.1 bits (157), Expect = 6e-09
Identities = 34/76 (44%), Positives = 43/76 (56%)
Frame = +1
Query: 4 YCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEMRGVGVKPSHVTF 183
Y K G L+ AR +FD + RD V WN MI GY +G EAL LF M KP+ VT
Sbjct: 147 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 206
Query: 184 IAPLTACGHSGLVSKG 231
++ L+ACG G + G
Sbjct: 207 LSVLSACGQLGALESG 222
>ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|222831850|gb|EEE70327.1|
predicted protein [Populus trichocarpa]
Length = 444
Score = 160 bits (405), Expect = 1e-37
Identities = 72/107 (67%), Positives = 89/107 (83%)
Frame = +1
Query: 1 MYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEMRGVGVKPSHVT 180
MY KCGSLEDAR VF+RI +DVVAWNSM++GYA+HGFS++AL LF EM +G +P+ +T
Sbjct: 116 MYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDIT 175
Query: 181 FIAPLTACGHSGLVSKGWEVFNLMKDEYGMEPKIEHFGCKVNLLGRA 321
FI L AC H+GLVS+GW+ F MKDEYG+EPK+EH+GC VNLLGRA
Sbjct: 176 FIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRA 222
Score = 73.2 bits (178), Expect = 2e-11
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = +1
Query: 4 YCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEMRGVGVKPSHVTF 183
Y K G +++AR +FD + RD + WN MI GYA HG E L LF +M V+P+ VT
Sbjct: 16 YAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTV 75
Query: 184 IAPLTACGHSGLVSKG 231
+A L+ACG +G + G
Sbjct: 76 LAVLSACGQTGALETG 91