BLASTX nr result

ID: Glycyrrhiza24_contig00027204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027204
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                              113   1e-23
ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...   110   1e-22
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]   108   3e-22
emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera]   106   2e-21
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   105   3e-21

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/82 (62%), Positives = 62/82 (75%)
 Frame = +1

Query: 13   ILEEFHSSPVGGHSGIKATLARLSTLFYWPGMHAHVKDFIRKCDVCQYSNYDPHSPYGLL 192
            IL+E+HSSP+GGH+GI  TLARL   FYWP M   VK +I+KC +CQ +  +   P GLL
Sbjct: 1074 ILQEYHSSPIGGHAGITRTLARLKAQFYWPKMQEDVKAYIQKCLICQQAKSNNTLPAGLL 1133

Query: 193  QPLPIPNQVWEDISMDFITKLP 258
            QPLPIP QVWED++MDFIT LP
Sbjct: 1134 QPLPIPQQVWEDVAMDFITGLP 1155


>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score =  110 bits (275), Expect = 1e-22
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = +1

Query: 4    KPSILEEFHSSPVGGHSGIKATLARLSTLFYWPGMHAHVKDFIRKCDVCQYSNYDPHSPY 183
            K  +L EFH++P  GH G+K TL  L+TLFYWP M A V+ ++  C VCQ + Y   +P 
Sbjct: 1039 KALLLHEFHATPFAGHGGVKRTLVLLATLFYWPRMRADVEQYVSACLVCQQTKYSTQAPA 1098

Query: 184  GLLQPLPIPNQVWEDISMDFITKLPP 261
            GLLQPLP+P+ VW +++MDFIT LPP
Sbjct: 1099 GLLQPLPVPSLVWNEVTMDFITNLPP 1124


>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
          Length = 647

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   HKPS-ILEEFHSSPVGGHSGIKATLARLSTLFYWPGMHAHVKDFIRKCDVCQYSNYDPHS 177
           H P+ +L EFH SP+GGHSG+  T  R++  FYWP M+  V +++  CDVCQ +     S
Sbjct: 196 HIPNQLLREFHDSPLGGHSGVLRTYKRIAQQFYWPSMYRMVNEYVSSCDVCQRAKASTLS 255

Query: 178 PYGLLQPLPIPNQVWEDISMDFITKLPP 261
           P GLLQPLPIP QVW+DI+MDFI  LPP
Sbjct: 256 PAGLLQPLPIPCQVWDDITMDFIEGLPP 283


>emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera]
          Length = 623

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   HKPS-ILEEFHSSPVGGHSGIKATLARLSTLFYWPGMHAHVKDFIRKCDVCQYSNYDPHS 177
           H P+ +L EFH SP+GGHSG+  T  R++  FYWP M+  V ++I  CDVCQ +     S
Sbjct: 188 HIPNQLLREFHDSPLGGHSGVLRTYKRIAQQFYWPSMYRMVNEYISSCDVCQRAKASTLS 247

Query: 178 PYGLLQPLPIPNQVWEDISMDFITKLPP 261
             GLLQPLPIP QVW+DI+MDFI  LPP
Sbjct: 248 STGLLQPLPIPCQVWDDITMDFIEGLPP 275


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  105 bits (263), Expect = 3e-21
 Identities = 46/84 (54%), Positives = 59/84 (70%)
 Frame = +1

Query: 7    PSILEEFHSSPVGGHSGIKATLARLSTLFYWPGMHAHVKDFIRKCDVCQYSNYDPHSPYG 186
            P++L EFHS+P GGHSG   T  RL+   YW GM   V++++R CD CQ   Y   SP G
Sbjct: 863  PTLLAEFHSTPQGGHSGFYRTYRRLAANVYWVGMKNTVQEYVRSCDTCQRQKYLASSPGG 922

Query: 187  LLQPLPIPNQVWEDISMDFITKLP 258
            LLQPLP+P+++WED+SMDFI  LP
Sbjct: 923  LLQPLPVPDRIWEDLSMDFIMGLP 946


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