BLASTX nr result

ID: Glycyrrhiza24_contig00027189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027189
         (192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ...    74   2e-11
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ...    74   2e-11
ref|XP_002314140.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002525676.1| transcription initiation factor brf1, putati...    69   5e-10
ref|XP_003578728.1| PREDICTED: transcription factor IIIB 60 kDa ...    68   9e-10

>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
           sativus]
          Length = 663

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/62 (56%), Positives = 41/62 (66%)
 Frame = +1

Query: 7   DESESFSDIDDQEVDGYLFNEEEKHYKKIIWEEVNREFLXXXXXXXXXXXXXXXXXXXNF 186
           D+SE++SDIDD EVDGYL NEEEKHYKKIIWEE+NRE+L                   NF
Sbjct: 459 DDSENWSDIDDVEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANF 518

Query: 187 EN 192
           +N
Sbjct: 519 QN 520


>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
           sativus]
          Length = 643

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/62 (56%), Positives = 41/62 (66%)
 Frame = +1

Query: 7   DESESFSDIDDQEVDGYLFNEEEKHYKKIIWEEVNREFLXXXXXXXXXXXXXXXXXXXNF 186
           D+SE++SDIDD EVDGYL NEEEKHYKKIIWEE+NRE+L                   NF
Sbjct: 459 DDSENWSDIDDVEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANF 518

Query: 187 EN 192
           +N
Sbjct: 519 QN 520


>ref|XP_002314140.1| predicted protein [Populus trichocarpa] gi|222850548|gb|EEE88095.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = +1

Query: 7   DESESFSDIDDQEVDGYLFNEEEKHYKKIIWEEVNREFL 123
           DES+ FSDIDD EVD YL NEEEK YKKIIWEE+NRE+L
Sbjct: 352 DESDGFSDIDDAEVDSYLHNEEEKRYKKIIWEEMNREYL 390


>ref|XP_002525676.1| transcription initiation factor brf1, putative [Ricinus communis]
           gi|223534976|gb|EEF36659.1| transcription initiation
           factor brf1, putative [Ricinus communis]
          Length = 625

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = +1

Query: 7   DESESFSDIDDQEVDGYLFNEEEKHYKKIIWEEVNREFL 123
           DES++FSDIDD EVDGYL NEEE  +KKIIWEE+NRE+L
Sbjct: 415 DESDNFSDIDDAEVDGYLHNEEEAQFKKIIWEEMNREYL 453


>ref|XP_003578728.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like
           [Brachypodium distachyon]
          Length = 580

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = +1

Query: 10  ESESFSDIDDQEVDGYLFNEEEKHYKKIIWEEVNREFL 123
           + ESFSDIDD EVDGYL NEEE HYKKIIWEE+N+E++
Sbjct: 415 DPESFSDIDDVEVDGYLHNEEETHYKKIIWEEMNKEYI 452


Top