BLASTX nr result

ID: Glycyrrhiza24_contig00027188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027188
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555451.1| PREDICTED: uncharacterized protein LOC100781...   115   5e-24
ref|XP_002268813.1| PREDICTED: uncharacterized protein LOC100266...   102   2e-20
gb|ADK25329.1| putative shattering protein [Oryza rufipogon] gi|...   102   4e-20
gb|ACH69724.1| shattering 4 [Oryza rufipogon] gi|197344820|gb|AC...   102   4e-20
ref|XP_002521872.1| transcription factor, putative [Ricinus comm...   101   5e-20

>ref|XP_003555451.1| PREDICTED: uncharacterized protein LOC100781887 [Glycine max]
          Length = 330

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/70 (72%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
 Frame = +2

Query: 68  GELRWKWVENYCWNHGCLRSQNQCNDKWDNLLRDYKKVRDY-XXXXXXXXXXXXXXXXYW 244
           GELRWKWVENYCW+HGCLRSQNQCNDKWDNLLRDYKKVRDY                 YW
Sbjct: 81  GELRWKWVENYCWSHGCLRSQNQCNDKWDNLLRDYKKVRDYESKSNDNDNNNNKHFPSYW 140

Query: 245 TINKQQRKEQ 274
           T+NKQQRKEQ
Sbjct: 141 TLNKQQRKEQ 150


>ref|XP_002268813.1| PREDICTED: uncharacterized protein LOC100266640 [Vitis vinifera]
          Length = 308

 Score =  102 bits (255), Expect = 2e-20
 Identities = 44/70 (62%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = +2

Query: 68  GELRWKWVENYCWNHGCLRSQNQCNDKWDNLLRDYKKVRDY-XXXXXXXXXXXXXXXXYW 244
           GELRWKWVENYCW+HGCLRSQNQCNDKWDNLLRDYKKVR+Y                 YW
Sbjct: 78  GELRWKWVENYCWSHGCLRSQNQCNDKWDNLLRDYKKVREYESRSSAAAASGDEHHPSYW 137

Query: 245 TINKQQRKEQ 274
            + K +RK++
Sbjct: 138 KMEKHERKDR 147


>gb|ADK25329.1| putative shattering protein [Oryza rufipogon]
           gi|300518079|gb|ADK25348.1| putative shattering protein
           [Oryza rufipogon]
          Length = 383

 Score =  102 bits (253), Expect = 4e-20
 Identities = 42/67 (62%), Positives = 47/67 (70%)
 Frame = +2

Query: 71  ELRWKWVENYCWNHGCLRSQNQCNDKWDNLLRDYKKVRDYXXXXXXXXXXXXXXXXYWTI 250
           E RWKWVENYCW +GCLRSQNQCNDKWDNLLRDYKKVRDY                YWT+
Sbjct: 109 EQRWKWVENYCWKNGCLRSQNQCNDKWDNLLRDYKKVRDYESRVAAAAANSAPLPSYWTM 168

Query: 251 NKQQRKE 271
            + +RK+
Sbjct: 169 ERHERKD 175


>gb|ACH69724.1| shattering 4 [Oryza rufipogon] gi|197344820|gb|ACH69725.1|
           shattering 4 [Oryza rufipogon]
           gi|374264355|gb|AEZ02526.1| shattering 4, partial [Oryza
           rufipogon]
          Length = 271

 Score =  102 bits (253), Expect = 4e-20
 Identities = 42/67 (62%), Positives = 47/67 (70%)
 Frame = +2

Query: 71  ELRWKWVENYCWNHGCLRSQNQCNDKWDNLLRDYKKVRDYXXXXXXXXXXXXXXXXYWTI 250
           E RWKWVENYCW +GCLRSQNQCNDKWDNLLRDYKKVRDY                YWT+
Sbjct: 109 EQRWKWVENYCWKNGCLRSQNQCNDKWDNLLRDYKKVRDYESRVAAAAANSAPLPSYWTM 168

Query: 251 NKQQRKE 271
            + +RK+
Sbjct: 169 ERHERKD 175


>ref|XP_002521872.1| transcription factor, putative [Ricinus communis]
           gi|223538910|gb|EEF40508.1| transcription factor,
           putative [Ricinus communis]
          Length = 312

 Score =  101 bits (252), Expect = 5e-20
 Identities = 44/67 (65%), Positives = 47/67 (70%)
 Frame = +2

Query: 68  GELRWKWVENYCWNHGCLRSQNQCNDKWDNLLRDYKKVRDYXXXXXXXXXXXXXXXXYWT 247
           GELRWKWVENYCW HGC RSQNQCNDKWDNLLRD+KKVRDY                YWT
Sbjct: 81  GELRWKWVENYCWAHGCFRSQNQCNDKWDNLLRDFKKVRDY--QARSNDSDSSSFPSYWT 138

Query: 248 INKQQRK 268
           + + QRK
Sbjct: 139 MERHQRK 145


Top