BLASTX nr result

ID: Glycyrrhiza24_contig00027158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027158
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609372.1| WD repeat-containing protein [Medicago trunc...   223   2e-56
ref|XP_003541474.1| PREDICTED: WD repeat-containing protein 11-l...   209   1e-52
ref|XP_002527186.1| nucleotide binding protein, putative [Ricinu...   165   3e-39
ref|XP_002325208.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
ref|XP_002875574.1| transducin family protein [Arabidopsis lyrat...   160   1e-37

>ref|XP_003609372.1| WD repeat-containing protein [Medicago truncatula]
            gi|355510427|gb|AES91569.1| WD repeat-containing protein
            [Medicago truncatula]
          Length = 1581

 Score =  223 bits (567), Expect = 2e-56
 Identities = 111/126 (88%), Positives = 117/126 (92%)
 Frame = +2

Query: 2    LKVLEPYRKEGCMLDDERAKLYASIVDKGCAARFAFAATIFGESSEALFWLQLPQALKHL 181
            LKVLEPYRKEGCMLDDERAKLYASIVDKGCAARFAFAAT+FGESSEALFWLQLPQALKHL
Sbjct: 1131 LKVLEPYRKEGCMLDDERAKLYASIVDKGCAARFAFAATVFGESSEALFWLQLPQALKHL 1190

Query: 182  MNKLSTKPPMKGPTTESVSEVDETSLLSRLSSKGNPTEEMGRDSQLRLMAFDQEELWRSA 361
            +NK S KPP KGPTTE VSEVDETSLLSR+SSKG PTE+M +  Q RLMAFDQEELW+SA
Sbjct: 1191 INKSSRKPPSKGPTTEPVSEVDETSLLSRISSKGKPTEDMSQGQQ-RLMAFDQEELWKSA 1249

Query: 362  SERISW 379
            SERISW
Sbjct: 1250 SERISW 1255


>ref|XP_003541474.1| PREDICTED: WD repeat-containing protein 11-like [Glycine max]
          Length = 1252

 Score =  209 bits (533), Expect = 1e-52
 Identities = 108/129 (83%), Positives = 115/129 (89%), Gaps = 3/129 (2%)
 Frame = +2

Query: 2    LKVLEPYRKEGCMLDDERAKLYASIVDKGCAARFAFAATIFGESSEALFWLQLPQALKHL 181
            LKVLEPYRKEGCMLDDERAKLYASIVDKGCAARFAFAA IFGESSEALFWLQLPQALKHL
Sbjct: 908  LKVLEPYRKEGCMLDDERAKLYASIVDKGCAARFAFAAIIFGESSEALFWLQLPQALKHL 967

Query: 182  MNKLSTKPPMKGPTTESVSEV-DETSLLSRLSSKGNPTEEMGRDS--QLRLMAFDQEELW 352
            +NK+  KPP K  T   +S+V DETSLLSR+SSKG PTEE GRDS  QLRLMAFD+EELW
Sbjct: 968  LNKVLRKPPPKESTAAPISDVDDETSLLSRISSKGKPTEETGRDSQGQLRLMAFDREELW 1027

Query: 353  RSASERISW 379
            +SASERISW
Sbjct: 1028 KSASERISW 1036


>ref|XP_002527186.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223533451|gb|EEF35199.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 1357

 Score =  165 bits (418), Expect = 3e-39
 Identities = 84/131 (64%), Positives = 103/131 (78%), Gaps = 5/131 (3%)
 Frame = +2

Query: 2    LKVLEPYRKEGCMLDDERAKLYASIVDKGCAARFAFAATIFGESSEALFWLQLPQALKHL 181
            LKVLEPYRKEGC+LDDERA+LYA+IV KG A RFAFAA +FGE+SEA+FWLQLPQALKHL
Sbjct: 991  LKVLEPYRKEGCILDDERARLYATIVHKGYAVRFAFAAAVFGETSEAIFWLQLPQALKHL 1050

Query: 182  MNKLSTKPPMKGPTTESVSEVDETSLLSRLSSKG-NPTEEMGRDS----QLRLMAFDQEE 346
            MNKL  K P K P +  + ++D+T++L+R++SKG + T    RDS    Q R MAF QEE
Sbjct: 1051 MNKLVNKSPQKVPISALIPDLDDTAMLNRIASKGKSVTGPEKRDSLHKCQFRSMAFKQEE 1110

Query: 347  LWRSASERISW 379
            LW +A+ERI W
Sbjct: 1111 LWENANERIPW 1121


>ref|XP_002325208.1| predicted protein [Populus trichocarpa] gi|222866642|gb|EEF03773.1|
            predicted protein [Populus trichocarpa]
          Length = 1311

 Score =  164 bits (415), Expect = 7e-39
 Identities = 83/131 (63%), Positives = 101/131 (77%), Gaps = 5/131 (3%)
 Frame = +2

Query: 2    LKVLEPYRKEGCMLDDERAKLYASIVDKGCAARFAFAATIFGESSEALFWLQLPQALKHL 181
            LKVL+PYR+EGC+LDDE A+LYA +V KGCAARFAFAA IFGE+SEALFWLQLP+ALKHL
Sbjct: 944  LKVLDPYRREGCILDDETARLYAIVVKKGCAARFAFAAAIFGETSEALFWLQLPRALKHL 1003

Query: 182  MNKLSTKPPMKGPTTESVSEVDETSLLSRLSSKGNP---TEEMG--RDSQLRLMAFDQEE 346
            M+KL TK   K P + S  E+D+ ++L+R+SSKG     TE+     + QLR MAF +EE
Sbjct: 1004 MDKLVTKSTQKAPVSASTPELDDVTMLNRISSKGRSVIGTEKKDPLSEGQLRSMAFQKEE 1063

Query: 347  LWRSASERISW 379
            LW SA ERI W
Sbjct: 1064 LWESACERIPW 1074


>ref|XP_002875574.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297321412|gb|EFH51833.1| transducin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1348

 Score =  160 bits (405), Expect = 1e-37
 Identities = 81/131 (61%), Positives = 101/131 (77%), Gaps = 5/131 (3%)
 Frame = +2

Query: 2    LKVLEPYRKEGCMLDDERAKLYASIVDKGCAARFAFAATIFGESSEALFWLQLPQALKHL 181
            LK+LEPYRKEGC+LDDERAKLYA++V KG AARFAFAA++FGE+SEALFWLQLPQA++HL
Sbjct: 978  LKILEPYRKEGCLLDDERAKLYANVVKKGYAARFAFAASVFGETSEALFWLQLPQAIRHL 1037

Query: 182  MNKLSTKPPMKGPTTESVSEVDETSLLSRLSSKGNPTEEMGR-----DSQLRLMAFDQEE 346
            MNKL+ K P K P+    S VDE ++LS++ S G  T E  +     D  LRLMAF++EE
Sbjct: 1038 MNKLTRKSPQKIPSPTLDSGVDEVAMLSKIPSTGISTPEARKIDSMCDGSLRLMAFEREE 1097

Query: 347  LWRSASERISW 379
            L   A+ER+ W
Sbjct: 1098 LRTRANERLPW 1108


Top