BLASTX nr result

ID: Glycyrrhiza24_contig00027156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027156
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45241.1| unknown [Lotus japonicus]                               68   7e-10
gb|ABD28646.1| Ribonuclease H [Medicago truncatula]                    55   1e-09
ref|XP_003617540.1| hypothetical protein MTR_5g092730 [Medicago ...    67   2e-09
ref|XP_003521929.1| PREDICTED: putative ribonuclease H protein A...    65   6e-09
ref|XP_003521928.1| PREDICTED: uncharacterized protein LOC100812...    65   6e-09

>gb|AFK45241.1| unknown [Lotus japonicus]
          Length = 165

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/110 (34%), Positives = 58/110 (52%)
 Frame = -2

Query: 497 KLNCDGAVSHLGEVAAVGGILRSQWGKFLLGFSSHLGHYSITEAKLRAIHMGAMLIKVRG 318
           KLN DG+ S   + AA GG+ R   G FLLGF+  +G  SI  A+L  +  G   +  RG
Sbjct: 38  KLNTDGSYSVDEDCAACGGVPRDHHGNFLLGFTMKVGVCSILHAELWGLVHGLRFVLGRG 97

Query: 317 LLSVEIETDSMDAIKLISEGCSQHHPFFNLISEIRNVLEHHGMWYVTHTF 168
              + IE DS   I+ +++GC   HP F L+ E  +++  +   +  H +
Sbjct: 98  FSKILIEADSAGTIEFLNKGCPVVHPCFPLVREFHHLVGQNCYIHWKHVY 147


>gb|ABD28646.1| Ribonuclease H [Medicago truncatula]
          Length = 208

 Score = 54.7 bits (130), Expect(2) = 1e-09
 Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = -2

Query: 494 LNCDGAVSHLGEVAAVGGILRSQWGKFLLGFSSHLGHYS-ITEAKLRAIHMGAMLIKVRG 318
           LN DG+ S +   A  GGI+R+  G +L  FS  +   + I  A+L AIH G  +    G
Sbjct: 53  LNVDGSCSGIPTRAGYGGIIRNSAGLYLSCFSGFIADSTDILLAELTAIHRGFSIASDMG 112

Query: 317 LLSVEIETDSMDAIKLISEGCSQHHPFFNLISEIRNVLEHH 195
           +  +   +DS+ +I LI+   S++H +  LI +I+++L  H
Sbjct: 113 VNEMACYSDSLLSINLITGQASKYHAYAVLIQDIKDLLSSH 153



 Score = 32.7 bits (73), Expect(2) = 1e-09
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -3

Query: 169 LHEGNQAAYCFAKFGLSLDSCNKVFNCIPHFALLSVRVDLFGTSFPR 29
           L EGNQ A   AKFG S ++   +    P    + +R D  GT FPR
Sbjct: 161 LREGNQCADFMAKFGASSNNVCFIHPSPPQDLHVLLRNDAIGTCFPR 207


>ref|XP_003617540.1| hypothetical protein MTR_5g092730 [Medicago truncatula]
           gi|355518875|gb|AET00499.1| hypothetical protein
           MTR_5g092730 [Medicago truncatula]
          Length = 153

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/100 (39%), Positives = 58/100 (58%)
 Frame = -2

Query: 497 KLNCDGAVSHLGEVAAVGGILRSQWGKFLLGFSSHLGHYSITEAKLRAIHMGAMLIKVRG 318
           K NCD AV +LG  AA+G ++R+  G+F    ++ +G  S  E+KL+ I     LI   G
Sbjct: 48  KSNCDSAVCNLGNDAAIGSLVRNGDGQF----NAFIGACSFLESKLQTILTWLNLIIENG 103

Query: 317 LLSVEIETDSMDAIKLISEGCSQHHPFFNLISEIRNVLEH 198
              V IE DS+ A KLI   C  +HP F ++  I+++L+H
Sbjct: 104 YSKVMIEFDSLIATKLIQLRCVSNHPHFKIVVGIKSMLDH 143


>ref|XP_003521929.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 192

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = -2

Query: 500 FKLNCDGAVSHLGEVAAVGGILRSQWGKFLLGFSSHLGH-YSITEAKLRAIHMGAMLIKV 324
           FKLNCDGA +  G   A GG+LR   G+F+LGFS  L    S  EA+L AI +G   +  
Sbjct: 38  FKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALEAELWAIKIGMQTVVA 97

Query: 323 RGLLSVEIETDSMDAIKLIS 264
           RG  ++ +E+DS+ AI++I+
Sbjct: 98  RGYRNLIVESDSLKAIQIIN 117


>ref|XP_003521928.1| PREDICTED: uncharacterized protein LOC100812157 [Glycine max]
          Length = 551

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = -2

Query: 500 FKLNCDGAVSHLGEVAAVGGILRSQWGKFLLGFSSHLGH-YSITEAKLRAIHMGAMLIKV 324
           FKLNCDGA +  G   A GG+LR   G+F+LGFS  L    S  EA+L AI +G   +  
Sbjct: 136 FKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALEAELWAIKIGMQTVVA 195

Query: 323 RGLLSVEIETDSMDAIKLIS 264
           RG  ++ +E+DS+ AI++I+
Sbjct: 196 RGYRNLIVESDSLKAIQIIN 215


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