BLASTX nr result

ID: Glycyrrhiza24_contig00027154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027154
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi...   164   1e-38
emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]   100   2e-19
emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]    99   4e-19
ref|XP_003544010.1| PREDICTED: uncharacterized protein LOC100782...    95   6e-18
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]    95   8e-18

>ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi|355493153|gb|AES74356.1|
            Histone deacetylase [Medicago truncatula]
          Length = 1775

 Score =  164 bits (414), Expect = 1e-38
 Identities = 86/158 (54%), Positives = 115/158 (72%), Gaps = 1/158 (0%)
 Frame = -1

Query: 541  LSSISESLLSKFVTCRILWQLWDEVHTYIHHQTKTKTRQLRSELRSLTKGTRTIADFFVR 362
            LS+IS SLLS+FV  R  WQ WDE+H+Y   Q KT++ QLRSELRS+TKG+RT+A+F  R
Sbjct: 542  LSTISPSLLSRFVLLRHSWQAWDEIHSYCFTQMKTRSGQLRSELRSITKGSRTVAEFIAR 601

Query: 361  VRTIADTLASIGDPVIPRDLFEIVLEALPEDYDAAVAAVISKPEICSLDELESLLLAHES 182
            +R I+++LASIGDPV  RDL E+VLEAL E++D  VA+V +K E+ SLDEL+  LL  ES
Sbjct: 602  IRAISESLASIGDPVSHRDLIEVVLEALLEEFDPIVASVNAKSEVVSLDELKYQLLTQES 661

Query: 181  RLEKHKK-AVTESVTVNLTQGGSKPHSTDEDNADSDSY 71
            R E  KK A+TE V+VNLT+  +    +   N+ + +Y
Sbjct: 662  RNENFKKAAITEPVSVNLTETANSESQSHGPNSQNHNY 699


>emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]
          Length = 1138

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/142 (33%), Positives = 86/142 (60%)
 Frame = -1

Query: 541 LSSISESLLSKFVTCRILWQLWDEVHTYIHHQTKTKTRQLRSELRSLTKGTRTIADFFVR 362
           LS + ES+L + V C   + LW  +  Y   QT+ K +Q +++L+   KG  TI ++ V+
Sbjct: 98  LSFVFESILPRLVGCDTSFLLWGRLEQYFVSQTRAKAKQFKTQLQHTKKGGSTIDEYLVK 157

Query: 361 VRTIADTLASIGDPVIPRDLFEIVLEALPEDYDAAVAAVISKPEICSLDELESLLLAHES 182
           ++   D+LAS+G  +  +D FE +L  LP DY++ V ++  + +  S++E+E+LL+AH S
Sbjct: 158 IKVCVDSLASVGVSLSTKDHFESILNGLPNDYESFVTSITLRNDDFSVEEIEALLMAHAS 217

Query: 181 RLEKHKKAVTESVTVNLTQGGS 116
           R+EK+  ++  S + ++    S
Sbjct: 218 RVEKNNSSLDSSSSAHVANSNS 239


>emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]
          Length = 1211

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/157 (31%), Positives = 91/157 (57%)
 Frame = -1

Query: 541 LSSISESLLSKFVTCRILWQLWDEVHTYIHHQTKTKTRQLRSELRSLTKGTRTIADFFVR 362
           LSS+ ES+L + V C   +  W  +  Y   QT+ K +Q +++ +   KG  TI ++  +
Sbjct: 47  LSSVFESILPRLVGCDTSFLFWGRLEQYFASQTRAKVKQFKTQFQHTKKGGSTIDEYLAK 106

Query: 361 VRTIADTLASIGDPVIPRDLFEIVLEALPEDYDAAVAAVISKPEICSLDELESLLLAHES 182
           +R   D+LASIG  +  +D  E +L+ LP DY++ V ++  + +  S++E+E LL+AHES
Sbjct: 107 IRVCVDSLASIGVSLSTKDHVESILDGLPSDYESFVTSITLRNDDFSVEEIEVLLMAHES 166

Query: 181 RLEKHKKAVTESVTVNLTQGGSKPHSTDEDNADSDSY 71
           R+EK+  ++  S + ++    + P+  ++ N    +Y
Sbjct: 167 RVEKNNSSLDSSPSAHV----ASPNFVEKGNRFKQNY 199


>ref|XP_003544010.1| PREDICTED: uncharacterized protein LOC100782657 [Glycine max]
          Length = 778

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 48/140 (34%), Positives = 83/140 (59%)
 Frame = -1

Query: 481 LWDEVHTYIHHQTKTKTRQLRSELRSLTKGTRTIADFFVRVRTIADTLASIGDPVIPRDL 302
           LW+++H Y   QT+ K R L +EL++     +T+ +F +R++ I D L S GDPV+P + 
Sbjct: 51  LWEQIHDYFQKQTRAKARILLTELKTTMLEQKTMREFHLRIKCIVDALGSCGDPVLPHEH 110

Query: 301 FEIVLEALPEDYDAAVAAVISKPEICSLDELESLLLAHESRLEKHKKAVTESVTVNLTQG 122
            + +LE LPE+Y   +    SK E   + E+E+L L HE  ++K +K   +S ++N+ QG
Sbjct: 111 LDAILEGLPEEYSPVIE---SKFEPLLIGEVEALQLTHEGSMKKFQKHFPDSSSINVAQG 167

Query: 121 GSKPHSTDEDNADSDSYQFQ 62
            +   S++  N+ S+ +  Q
Sbjct: 168 YNS--SSNSYNSSSNDFSSQ 185


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 43/127 (33%), Positives = 81/127 (63%)
 Frame = -1

Query: 541 LSSISESLLSKFVTCRILWQLWDEVHTYIHHQTKTKTRQLRSELRSLTKGTRTIADFFVR 362
           L+SI+++LL++ V C    Q+W  +  Y   Q + K  Q +++L +  KG  +I+D+ ++
Sbjct: 88  LASITDALLTRMVNCDTSAQVWKTLELYFATQVRAKVTQFKTQLHNTKKGDLSISDYLLK 147

Query: 361 VRTIADTLASIGDPVIPRDLFEIVLEALPEDYDAAVAAVISKPEICSLDELESLLLAHES 182
           +R + D LA +G  +  +D  + + E LP+DY+  + +V S+ +  +++E+E+LLLA ES
Sbjct: 148 IRNVVDLLALVGHKISVKDHIBAIFEGLPQDYETFIISVNSRLDPYTVEEIEALLLAQES 207

Query: 181 RLEKHKK 161
           R+EK+ K
Sbjct: 208 RIEKNIK 214


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