BLASTX nr result

ID: Glycyrrhiza24_contig00027124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027124
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42938.1| unknown [Medicago truncatula]                           65   6e-09
ref|XP_003549959.1| PREDICTED: novel plant SNARE 11-like [Glycin...    63   4e-08
gb|ACU19240.1| unknown [Glycine max]                                   60   2e-07
ref|XP_002879536.1| NPSN11 [Arabidopsis lyrata subsp. lyrata] gi...    56   4e-06

>gb|AFK42938.1| unknown [Medicago truncatula]
          Length = 105

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 35/58 (60%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -3

Query: 553 RQVATDKCXXXXXXXXXXXXXXXXXXXXVHPENKDIRDIPGLAPPAVT-NRRLLWDHS 383
           RQVATDKC                    VHPENKDIRDIPGLAPP VT NRRLLW+HS
Sbjct: 48  RQVATDKCIMALLFLIVIGVIAIIIVKLVHPENKDIRDIPGLAPPVVTNNRRLLWNHS 105


>ref|XP_003549959.1| PREDICTED: novel plant SNARE 11-like [Glycine max]
          Length = 261

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 34/57 (59%), Positives = 34/57 (59%)
 Frame = -3

Query: 553 RQVATDKCXXXXXXXXXXXXXXXXXXXXVHPENKDIRDIPGLAPPAVTNRRLLWDHS 383
           RQVATDKC                    VHPENKDIRDIPGLAPP V NRRLLW HS
Sbjct: 206 RQVATDKCIMALLFLIVIGVIAIIIVKLVHPENKDIRDIPGLAPP-VQNRRLLWSHS 261


>gb|ACU19240.1| unknown [Glycine max]
          Length = 261

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/57 (56%), Positives = 34/57 (59%)
 Frame = -3

Query: 553 RQVATDKCXXXXXXXXXXXXXXXXXXXXVHPENKDIRDIPGLAPPAVTNRRLLWDHS 383
           RQVATDKC                    VHP+NKDIRDIPGLAPP V NRRLLW H+
Sbjct: 206 RQVATDKCIMALLFLIVIGVIAIIIVKLVHPDNKDIRDIPGLAPP-VQNRRLLWSHN 261


>ref|XP_002879536.1| NPSN11 [Arabidopsis lyrata subsp. lyrata]
           gi|297325375|gb|EFH55795.1| NPSN11 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 263

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/56 (53%), Positives = 34/56 (60%)
 Frame = -3

Query: 553 RQVATDKCXXXXXXXXXXXXXXXXXXXXVHPENKDIRDIPGLAPPAVTNRRLLWDH 386
           RQVATDKC                    V+P NKDIR+IPGLAPPA+ NRRLLW+H
Sbjct: 208 RQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNNKDIRNIPGLAPPAM-NRRLLWNH 262


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