BLASTX nr result

ID: Glycyrrhiza24_contig00027121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027121
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607809.1| hypothetical protein MTR_4g083140 [Medicago ...    90   3e-16
ref|XP_003616234.1| Helicase-like protein [Medicago truncatula] ...    77   2e-12
ref|XP_002317287.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
ref|XP_003591570.1| hypothetical protein MTR_1g089090 [Medicago ...    74   3e-11
ref|XP_003591605.1| Rac GTPase activating protein [Medicago trun...    69   6e-10

>ref|XP_003607809.1| hypothetical protein MTR_4g083140 [Medicago truncatula]
           gi|355508864|gb|AES90006.1| hypothetical protein
           MTR_4g083140 [Medicago truncatula]
          Length = 77

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 54/80 (67%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
 Frame = -2

Query: 349 MVK-EMRSIQNCGEVAPALLITPQKCSPG-FPRLEPIIEEGPADLGFPIVMPKRMLFLVP 176
           MVK EM+ IQNCGEVAPALLITP+KCS   F RLEPIIEEG   L   I MPK+MLFL P
Sbjct: 1   MVKMEMKGIQNCGEVAPALLITPRKCSSSKFSRLEPIIEEGAESL--HINMPKKMLFLAP 58

Query: 175 AFLSFVSYFLLYRSYVSA*N 116
            F+SF+SY L+   YVSA N
Sbjct: 59  VFISFLSYILVV-VYVSASN 77


>ref|XP_003616234.1| Helicase-like protein [Medicago truncatula]
           gi|355517569|gb|AES99192.1| Helicase-like protein
           [Medicago truncatula]
          Length = 127

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 41/57 (71%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
 Frame = -2

Query: 349 MVK-EMRSIQNCGEVAPALLITPQKCSPGFPRLEPIIEEGPADLGFPIVMPKRMLFL 182
           MVK  MR IQNCGEVAPAL+ TP+KCS  FPRLEPIIEEGP       +MPKRMLFL
Sbjct: 1   MVKMNMRGIQNCGEVAPALIRTPKKCSSKFPRLEPIIEEGPESFQ---IMPKRMLFL 54


>ref|XP_002317287.1| predicted protein [Populus trichocarpa] gi|222860352|gb|EEE97899.1|
           predicted protein [Populus trichocarpa]
          Length = 74

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 37/73 (50%), Positives = 52/73 (71%)
 Frame = -2

Query: 349 MVKEMRSIQNCGEVAPALLITPQKCSPGFPRLEPIIEEGPADLGFPIVMPKRMLFLVPAF 170
           M+K+M+ +Q  G+VAPALLI+ Q+    FPRL+ IIEEG  + G  + MPKR+LFL+P  
Sbjct: 1   MMKKMKCMQKWGDVAPALLISQQRSRSSFPRLDTIIEEGSGNNGV-VAMPKRVLFLLPIV 59

Query: 169 LSFVSYFLLYRSY 131
            S +SYFL++  Y
Sbjct: 60  ASLISYFLMHGRY 72


>ref|XP_003591570.1| hypothetical protein MTR_1g089090 [Medicago truncatula]
           gi|355480618|gb|AES61821.1| hypothetical protein
           MTR_1g089090 [Medicago truncatula]
          Length = 99

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
 Frame = -2

Query: 355 KRMVK---EMRSIQNCGEVAPALLITPQKCSPGFPRLEPIIEEGPADLGFPIVMPKRM 191
           ++MVK    +R IQNCGEVAPAL+ITP+KCS  FPRLEPIIEEGP +L F   + K +
Sbjct: 3   RKMVKVEMRLRGIQNCGEVAPALIITPKKCSSKFPRLEPIIEEGPKNLKFTSTVEKSL 60


>ref|XP_003591605.1| Rac GTPase activating protein [Medicago truncatula]
           gi|355480653|gb|AES61856.1| Rac GTPase activating
           protein [Medicago truncatula]
          Length = 428

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 3/45 (6%)
 Frame = -2

Query: 355 KRMVK---EMRSIQNCGEVAPALLITPQKCSPGFPRLEPIIEEGP 230
           ++MVK    +R IQNCGEVAPAL+ITP+KCS  FPRLEPIIEEGP
Sbjct: 3   RKMVKVEMRLRGIQNCGEVAPALIITPKKCSSKFPRLEPIIEEGP 47


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