BLASTX nr result

ID: Glycyrrhiza24_contig00027104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027104
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604079.1| Chromo domain-containing protein LHP1 [Medic...   109   5e-22
ref|XP_003520360.1| PREDICTED: chromo domain-containing protein ...   108   6e-22
ref|XP_003548606.1| PREDICTED: chromo domain-containing protein ...   107   1e-21
ref|XP_004145010.1| PREDICTED: chromo domain-containing protein ...   100   4e-19
ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis...    99   6e-19

>ref|XP_003604079.1| Chromo domain-containing protein LHP1 [Medicago truncatula]
           gi|355493127|gb|AES74330.1| Chromo domain-containing
           protein LHP1 [Medicago truncatula]
          Length = 275

 Score =  109 bits (272), Expect = 5e-22
 Identities = 56/67 (83%), Positives = 59/67 (88%)
 Frame = +3

Query: 3   ACNIVKIIKPIGCYSASLSCNTQDVLVTFMAIRSDGTEVMVDNKYLKAYNPLLLINFYEQ 182
           A NIVKIIK IG YS SLSC  QD+LVTFMA+RSDGTEVMVDNKYLKA NP LLINFYEQ
Sbjct: 210 ASNIVKIIKAIG-YSTSLSCYKQDILVTFMAMRSDGTEVMVDNKYLKANNPQLLINFYEQ 268

Query: 183 HLRYSPT 203
           HLRY+PT
Sbjct: 269 HLRYNPT 275


>ref|XP_003520360.1| PREDICTED: chromo domain-containing protein LHP1-like [Glycine max]
          Length = 450

 Score =  108 bits (271), Expect = 6e-22
 Identities = 54/67 (80%), Positives = 60/67 (89%)
 Frame = +3

Query: 3   ACNIVKIIKPIGCYSASLSCNTQDVLVTFMAIRSDGTEVMVDNKYLKAYNPLLLINFYEQ 182
           A NIV IIKP+G YSAS++  TQDVLVTF+A +SDGTEVMVDNKYLK +NPLLLINFYEQ
Sbjct: 384 ASNIVNIIKPVG-YSASVASGTQDVLVTFVASKSDGTEVMVDNKYLKTFNPLLLINFYEQ 442

Query: 183 HLRYSPT 203
           HLRYSPT
Sbjct: 443 HLRYSPT 449


>ref|XP_003548606.1| PREDICTED: chromo domain-containing protein LHP1-like [Glycine max]
          Length = 448

 Score =  107 bits (268), Expect = 1e-21
 Identities = 53/67 (79%), Positives = 60/67 (89%)
 Frame = +3

Query: 3   ACNIVKIIKPIGCYSASLSCNTQDVLVTFMAIRSDGTEVMVDNKYLKAYNPLLLINFYEQ 182
           A NIV I+KP+G YSAS++   QDVLVTF+A +SDGTEVMVDNKYLKA+NPLLLINFYEQ
Sbjct: 382 ASNIVNIVKPVG-YSASVASGMQDVLVTFVASKSDGTEVMVDNKYLKAFNPLLLINFYEQ 440

Query: 183 HLRYSPT 203
           HLRYSPT
Sbjct: 441 HLRYSPT 447


>ref|XP_004145010.1| PREDICTED: chromo domain-containing protein LHP1-like [Cucumis
           sativus] gi|449473948|ref|XP_004154028.1| PREDICTED:
           chromo domain-containing protein LHP1-like [Cucumis
           sativus] gi|449498945|ref|XP_004160678.1| PREDICTED:
           chromo domain-containing protein LHP1-like [Cucumis
           sativus]
          Length = 454

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 50/63 (79%), Positives = 58/63 (92%)
 Frame = +3

Query: 9   NIVKIIKPIGCYSASLSCNTQDVLVTFMAIRSDGTEVMVDNKYLKAYNPLLLINFYEQHL 188
           +I KIIKP+G YSAS+S N QDVLVTF+A+RSDGTEV+VDNK+LKA NPLLLINFYEQHL
Sbjct: 390 SITKIIKPLG-YSASVSNNMQDVLVTFVAMRSDGTEVVVDNKFLKAINPLLLINFYEQHL 448

Query: 189 RYS 197
           RY+
Sbjct: 449 RYT 451


>ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis vinifera]
           gi|296090196|emb|CBI40015.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 51/64 (79%), Positives = 56/64 (87%)
 Frame = +3

Query: 12  IVKIIKPIGCYSASLSCNTQDVLVTFMAIRSDGTEVMVDNKYLKAYNPLLLINFYEQHLR 191
           I +IIKPI  YSAS+S + QDV VTFMA+RSDG EVMVDNK+LKA NPLLLINFYEQHLR
Sbjct: 361 ITEIIKPIS-YSASISNDAQDVSVTFMAMRSDGKEVMVDNKFLKANNPLLLINFYEQHLR 419

Query: 192 YSPT 203
           YSPT
Sbjct: 420 YSPT 423


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