BLASTX nr result

ID: Glycyrrhiza24_contig00027093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027093
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                              182   3e-44
emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]   135   5e-30
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]   134   8e-30
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   132   2e-29
emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]   130   1e-28

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  182 bits (461), Expect = 3e-44
 Identities = 87/124 (70%), Positives = 97/124 (78%)
 Frame = -3

Query: 374  PKQWYKALPWAEFWYNTSYHMSAGMTPFKALYGKDPPTLTRYQPSPDDPIDVQTQLTSRD 195
            PK W KALPWAEFWYNT+YHMS GMTPF+ALYG++PPTLTR   S DDP +V+ QLT RD
Sbjct: 1263 PKGWVKALPWAEFWYNTAYHMSLGMTPFRALYGREPPTLTRQACSIDDPAEVREQLTDRD 1322

Query: 194  EILQLLKQNLFRAQQTMKAQADKK*QHIDFAVGDNVLVKLQPYRQASVALRKHQKLGMRY 15
             +L  LK NL RAQQ MK QADKK   + F +GD VLVKLQPYRQ S  LRK+QKL MRY
Sbjct: 1323 ALLAKLKINLTRAQQVMKRQADKKRLDVSFQIGDEVLVKLQPYRQHSAVLRKNQKLSMRY 1382

Query: 14   FGPF 3
            FGPF
Sbjct: 1383 FGPF 1386


>emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]
          Length = 1259

 Score =  135 bits (339), Expect = 5e-30
 Identities = 63/124 (50%), Positives = 82/124 (66%)
 Frame = -3

Query: 374  PKQWYKALPWAEFWYNTSYHMSAGMTPFKALYGKDPPTLTRYQPSPDDPIDVQTQLTSRD 195
            P+ W   LPWAE+WYNT+YH S GMTPF+ALYG  PP +  Y+       ++  Q+T+RD
Sbjct: 1073 PRHWNSLLPWAEYWYNTTYHSSTGMTPFQALYGXPPPAIPSYEIGSCPIEELDDQMTARD 1132

Query: 194  EILQLLKQNLFRAQQTMKAQADKK*QHIDFAVGDNVLVKLQPYRQASVALRKHQKLGMRY 15
            E+LQ LK +L  A   MK  ADKK + ++F VGD V ++LQPYRQ SV  R   KL  RY
Sbjct: 1133 ELLQELKAHLHAANNRMKQAADKKRREVNFEVGDWVYLRLQPYRQQSVFRRTSHKLSNRY 1192

Query: 14   FGPF 3
            +GP+
Sbjct: 1193 YGPY 1196


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/124 (50%), Positives = 83/124 (66%)
 Frame = -3

Query: 374  PKQWYKALPWAEFWYNTSYHMSAGMTPFKALYGKDPPTLTRYQPSPDDPIDVQTQLTSRD 195
            P+ W   LPWAE+WYNT+YH S GMTPF+ALYG+ PP +  Y+       ++  Q+T+R+
Sbjct: 1102 PRHWNSLLPWAEYWYNTTYHSSTGMTPFQALYGRPPPAIPSYEIGSCPIEELDDQMTARN 1161

Query: 194  EILQLLKQNLFRAQQTMKAQADKK*QHIDFAVGDNVLVKLQPYRQASVALRKHQKLGMRY 15
            E+LQ LK +L  A   MK  ADKK + ++F VGD V ++LQPYRQ SV  R   KL  RY
Sbjct: 1162 ELLQELKAHLHAANNRMKQAADKKRREVNFEVGDWVYLRLQPYRQQSVFRRTSHKLSNRY 1221

Query: 14   FGPF 3
            +GP+
Sbjct: 1222 YGPY 1225


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/124 (50%), Positives = 85/124 (68%)
 Frame = -3

Query: 374  PKQWYKALPWAEFWYNTSYHMSAGMTPFKALYGKDPPTLTRYQPSPDDPIDVQTQLTSRD 195
            P  W++ LPWAE+WYNTSYH +   TPF+A+YG++PP L RY   P +  +V+  L  RD
Sbjct: 1388 PTSWFQWLPWAEYWYNTSYHSATKTTPFQAVYGREPPVLLRYGDIPTNNANVEELLKDRD 1447

Query: 194  EILQLLKQNLFRAQQTMKAQADKK*QHIDFAVGDNVLVKLQPYRQASVALRKHQKLGMRY 15
             +L  L++NL  AQ  MK  ADK  + + F + + V +KL+PYRQ+SVA RK++KL  RY
Sbjct: 1448 GMLVELRENLEIAQAQMKKAADKSRRDVAFEIDEWVYLKLRPYRQSSVAHRKNEKLSQRY 1507

Query: 14   FGPF 3
            FGPF
Sbjct: 1508 FGPF 1511


>emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
          Length = 1384

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/124 (51%), Positives = 80/124 (64%)
 Frame = -3

Query: 374  PKQWYKALPWAEFWYNTSYHMSAGMTPFKALYGKDPPTLTRYQPSPDDPIDVQTQLTSRD 195
            P++W   LPWAEFWYNT+YH S GMTPF+ALYG+ PPT+  Y         V   L SR+
Sbjct: 1127 PRKWSFFLPWAEFWYNTTYHASTGMTPFQALYGRLPPTIPHYLMGTTPIHAVDQNLASRN 1186

Query: 194  EILQLLKQNLFRAQQTMKAQADKK*QHIDFAVGDNVLVKLQPYRQASVALRKHQKLGMRY 15
             IL+ LK NL  A   MK  AD K ++I++ VGD V +KLQPYRQ SV     QKL  R+
Sbjct: 1187 AILRQLKTNLHAATNRMKQVADSKRRNIEYQVGDMVFLKLQPYRQQSVFCXASQKLASRF 1246

Query: 14   FGPF 3
            +GP+
Sbjct: 1247 YGPY 1250


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