BLASTX nr result

ID: Glycyrrhiza24_contig00027083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027083
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containi...   151   8e-35
gb|AFK33357.1| unknown [Medicago truncatula]                          142   4e-32
ref|XP_002300545.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27
ref|XP_002317023.1| predicted protein [Populus trichocarpa] gi|2...   118   8e-25
ref|XP_002513427.1| pentatricopeptide repeat-containing protein,...   117   1e-24

>ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Glycine max]
          Length = 572

 Score =  151 bits (381), Expect = 8e-35
 Identities = 72/93 (77%), Positives = 84/93 (90%)
 Frame = +3

Query: 3   EENDYVPHLDNYNALIRGFCKIQRTDLSIEIFQMMVNKGCMPNEITYSILIEGIAFQEEM 182
           EEND+ P +DNYNALI GFCK QRTDLSIEIF MMVNKGC+PNE TY+IL+EG+AF+EE 
Sbjct: 475 EENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEEET 534

Query: 183 DIAADLVKELYSKRVISQNTVERLSMQYDLKEL 281
           DIAADL+KELY K+V+SQ+TVERL MQYD+KEL
Sbjct: 535 DIAADLMKELYLKKVLSQSTVERLCMQYDIKEL 567


>gb|AFK33357.1| unknown [Medicago truncatula]
          Length = 389

 Score =  142 bits (358), Expect = 4e-32
 Identities = 67/94 (71%), Positives = 81/94 (86%)
 Frame = +3

Query: 3   EENDYVPHLDNYNALIRGFCKIQRTDLSIEIFQMMVNKGCMPNEITYSILIEGIAFQEEM 182
           EE+ YVPH+DNYNALI G CK QR D+SIEIFQMMVNKGCMPNE+TY+I +E +AF+EEM
Sbjct: 295 EEHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMMVNKGCMPNEMTYNIFVEALAFEEEM 354

Query: 183 DIAADLVKELYSKRVISQNTVERLSMQYDLKELT 284
           ++AA L+ ELY K V+SQ+TVERL MQY LK+LT
Sbjct: 355 ELAATLLNELYLKGVLSQSTVERLFMQYALKQLT 388


>ref|XP_002300545.1| predicted protein [Populus trichocarpa] gi|222847803|gb|EEE85350.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  127 bits (318), Expect = 2e-27
 Identities = 62/95 (65%), Positives = 78/95 (82%)
 Frame = +3

Query: 3   EENDYVPHLDNYNALIRGFCKIQRTDLSIEIFQMMVNKGCMPNEITYSILIEGIAFQEEM 182
           EENDY P L N+NALI GFCK  RTDLS+EIF+MM+ KG  PNE TY+IL+EGIA +EE 
Sbjct: 473 EENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEK 532

Query: 183 DIAADLVKELYSKRVISQNTVERLSMQYDLKELTV 287
           ++AA+++KELY ++V+ +NTVERL MQYDLK L V
Sbjct: 533 ELAAEVLKELYIRQVMRRNTVERLVMQYDLKGLPV 567


>ref|XP_002317023.1| predicted protein [Populus trichocarpa] gi|222860088|gb|EEE97635.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score =  118 bits (295), Expect = 8e-25
 Identities = 56/95 (58%), Positives = 76/95 (80%)
 Frame = +3

Query: 3   EENDYVPHLDNYNALIRGFCKIQRTDLSIEIFQMMVNKGCMPNEITYSILIEGIAFQEEM 182
           EENDY P LDN+NALI GFCK  RTDLS++I +MMV KG  PNE TY+I++EGIA +EE 
Sbjct: 361 EENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEK 420

Query: 183 DIAADLVKELYSKRVISQNTVERLSMQYDLKELTV 287
           ++AA+++KEL  ++V+ +NT ERL +QY+L+ L V
Sbjct: 421 ELAAEVLKELLLRQVMRRNTAERLVLQYNLEALPV 455


>ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547335|gb|EEF48830.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 567

 Score =  117 bits (294), Expect = 1e-24
 Identities = 53/91 (58%), Positives = 76/91 (83%)
 Frame = +3

Query: 3   EENDYVPHLDNYNALIRGFCKIQRTDLSIEIFQMMVNKGCMPNEITYSILIEGIAFQEEM 182
           EE+ Y P +DN+NALI GFCK  RTDLS+E+F+MM+ KG  P+E TY+IL+EGI  +EE 
Sbjct: 473 EEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEK 532

Query: 183 DIAADLVKELYSKRVISQNTVERLSMQYDLK 275
           ++AA++++EL+ ++V+SQ+TVERL MQYDL+
Sbjct: 533 ELAAEVLRELHLRQVMSQSTVERLIMQYDLE 563


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