BLASTX nr result

ID: Glycyrrhiza24_contig00027055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027055
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containi...   175   3e-42
emb|CBI28334.3| unnamed protein product [Vitis vinifera]              175   3e-42
emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]   175   3e-42
ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31

>ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 616

 Score =  175 bits (444), Expect = 3e-42
 Identities = 78/113 (69%), Positives = 99/113 (87%)
 Frame = +1

Query: 1   VGDWNSMISGLALHGLGHEAIKVFLDLEREEIEPDDITFLGLLRACNHGGLVEEGQFYFE 180
           +GDWNSMISGLA+HGL  EA+ +F+++ER +IEP++ITFLGLL  C+HGGLVEEGQFYFE
Sbjct: 309 IGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFE 368

Query: 181 TMQVKYKVVPKIQHYGCIIDLLCRAGRLEEALGVMRDLPLEPDVLIWKNILSA 339
           +M  KYK+VP+IQHYGC+IDL  RAGRLE+ALGV++++P E D+L WK ILSA
Sbjct: 369 SMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSA 421


>emb|CBI28334.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  175 bits (444), Expect = 3e-42
 Identities = 78/113 (69%), Positives = 99/113 (87%)
 Frame = +1

Query: 1   VGDWNSMISGLALHGLGHEAIKVFLDLEREEIEPDDITFLGLLRACNHGGLVEEGQFYFE 180
           +GDWNSMISGLA+HGL  EA+ +F+++ER +IEP++ITFLGLL  C+HGGLVEEGQFYFE
Sbjct: 297 IGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFE 356

Query: 181 TMQVKYKVVPKIQHYGCIIDLLCRAGRLEEALGVMRDLPLEPDVLIWKNILSA 339
           +M  KYK+VP+IQHYGC+IDL  RAGRLE+ALGV++++P E D+L WK ILSA
Sbjct: 357 SMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSA 409


>emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
          Length = 1033

 Score =  175 bits (444), Expect = 3e-42
 Identities = 78/113 (69%), Positives = 99/113 (87%)
 Frame = +1

Query: 1   VGDWNSMISGLALHGLGHEAIKVFLDLEREEIEPDDITFLGLLRACNHGGLVEEGQFYFE 180
           +GDWNSMISGLA+HGL  EA+ +F+++ER +IEP++ITFLGLL  C+HGGLVEEGQFYFE
Sbjct: 340 IGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFE 399

Query: 181 TMQVKYKVVPKIQHYGCIIDLLCRAGRLEEALGVMRDLPLEPDVLIWKNILSA 339
           +M  KYK+VP+IQHYGC+IDL  RAGRLE+ALGV++++P E D+L WK ILSA
Sbjct: 400 SMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSA 452


>ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|222859457|gb|EEE97004.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/110 (57%), Positives = 86/110 (78%)
 Frame = +1

Query: 10  WNSMISGLALHGLGHEAIKVFLDLEREEIEPDDITFLGLLRACNHGGLVEEGQFYFETMQ 189
           WN+MISGLA+HGL  +AIKVF  +E E + PD ITFLG+L AC+H GLV+EG+ YF+ M+
Sbjct: 211 WNAMISGLAVHGLALDAIKVFTKMEVENVLPDAITFLGILTACSHCGLVKEGRKYFDLMR 270

Query: 190 VKYKVVPKIQHYGCIIDLLCRAGRLEEALGVMRDLPLEPDVLIWKNILSA 339
            +Y V P I+HYG ++DLL RAG LEEA  +++ +P+EPDV+IW+ +L A
Sbjct: 271 SRYSVQPHIEHYGAMVDLLGRAGLLEEAFAMIKSMPMEPDVVIWRALLGA 320


>ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|222861492|gb|EEE99034.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  137 bits (346), Expect = 7e-31
 Identities = 60/113 (53%), Positives = 84/113 (74%)
 Frame = +1

Query: 1   VGDWNSMISGLALHGLGHEAIKVFLDLEREEIEPDDITFLGLLRACNHGGLVEEGQFYFE 180
           V  WN++I GLA+HGLG  A    +++ER  +EPDDITF+GLL AC H GLV+EG   FE
Sbjct: 422 VDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFE 481

Query: 181 TMQVKYKVVPKIQHYGCIIDLLCRAGRLEEALGVMRDLPLEPDVLIWKNILSA 339
            M+  +KV PK+QHYGC++D+L RAG +EEA   + ++P EP+ +IW+++LSA
Sbjct: 482 LMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSA 534


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