BLASTX nr result

ID: Glycyrrhiza24_contig00027045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027045
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like...   100   3e-19
ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp....    92   6e-17
ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thali...    91   2e-16
ref|XP_002523741.1| zinc finger protein, putative [Ricinus commu...    88   1e-15
ref|XP_002298167.1| predicted protein [Populus trichocarpa] gi|2...    86   5e-15

>ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera]
          Length = 244

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 41/75 (54%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = -2

Query: 332 PCRGEGLAAGKSLPVCSYRGDTKQP-ECAICLEEFRECDTVKVIPYCGHVFHPECIDTWL 156
           P +G   +   SLP+ SY GD K+  +C +CL +F + DTVK+IPYC HVFHP CIDTWL
Sbjct: 108 PSKGLDASTVSSLPLFSYHGDAKETLDCPVCLTQFEDKDTVKIIPYCRHVFHPPCIDTWL 167

Query: 155 AAHVTCPICRCAKLF 111
           ++HV+CP+CR  +LF
Sbjct: 168 SSHVSCPVCRSTQLF 182


>ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326798|gb|EFH57218.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 234

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 326 RGEGLAAGKSLPVCSYRGDTKQ--PECAICLEEFRECDTVKVIPYCGHVFHPECIDTWLA 153
           RG      +SLPV  Y   TKQ   +C ICL EF E +TVKVIP+CGHVFH +C+DTWL+
Sbjct: 111 RGLDSQTVRSLPVYHYTKATKQRNEDCVICLSEFEEGETVKVIPHCGHVFHVDCVDTWLS 170

Query: 152 AHVTCPICRCAKLF 111
           ++VTCP+CR  +LF
Sbjct: 171 SYVTCPLCRSNQLF 184


>ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana]
           gi|68565332|sp|Q9SJJ7.1|ATL57_ARATH RecName:
           Full=RING-H2 finger protein ATL57
           gi|4510422|gb|AAD21508.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|26452105|dbj|BAC43142.1| putative RING finger protein
           [Arabidopsis thaliana] gi|28950793|gb|AAO63320.1|
           At2g27940 [Arabidopsis thaliana]
           gi|330252968|gb|AEC08062.1| RING-H2 finger protein ATL57
           [Arabidopsis thaliana]
          Length = 237

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 41/74 (55%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 326 RGEGLAAGKSLPVCSYRGDTKQ--PECAICLEEFRECDTVKVIPYCGHVFHPECIDTWLA 153
           RG    A +SLPV  Y    KQ   +C ICL +F E +TVKVIP+CGHVFH +C+DTWL+
Sbjct: 114 RGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLS 173

Query: 152 AHVTCPICRCAKLF 111
           ++VTCP+CR  +LF
Sbjct: 174 SYVTCPLCRSNQLF 187


>ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
           gi|223537045|gb|EEF38681.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 254

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/61 (67%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
 Frame = -2

Query: 302 KSLPVCSY-RGDTK-QPECAICLEEFRECDTVKVIPYCGHVFHPECIDTWLAAHVTCPIC 129
           KSLPV SY  G+ K Q ECA+CL EF E +TVK IPYC H+FH ECI+TWL  HVTCP+C
Sbjct: 114 KSLPVYSYYHGEAKYQIECAVCLGEFEEKETVKSIPYCKHMFHLECIETWLKLHVTCPVC 173

Query: 128 R 126
           R
Sbjct: 174 R 174


>ref|XP_002298167.1| predicted protein [Populus trichocarpa] gi|222845425|gb|EEE82972.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 42/63 (66%), Positives = 47/63 (74%), Gaps = 2/63 (3%)
 Frame = -2

Query: 299 SLPVCSY-RGDTK-QPECAICLEEFRECDTVKVIPYCGHVFHPECIDTWLAAHVTCPICR 126
           SLPV SY  GD K Q ECAICL EF E + VK+IP C HVFH +CIDTWL  HVTCP+CR
Sbjct: 71  SLPVYSYYHGDVKYQIECAICLGEFEEKEAVKMIPKCHHVFHLQCIDTWLEMHVTCPVCR 130

Query: 125 CAK 117
            A+
Sbjct: 131 GAQ 133


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