BLASTX nr result

ID: Glycyrrhiza24_contig00027038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027038
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containi...   131   6e-29
ref|XP_003605422.1| Pentatricopeptide repeat-containing protein ...   126   2e-27
ref|XP_002321443.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...   108   3e-22
ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containi...   108   3e-22

>ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  131 bits (329), Expect = 6e-29
 Identities = 59/70 (84%), Positives = 68/70 (97%)
 Frame = +1

Query: 1   VLLSNLYASEGRWDDVAAIRKSMKQRKITKEAGYSWVEVENQVHKFHVGDTSHPQAQEIY 180
           +LLSNLYASEGRWDDVAA+RKSMKQ+K+ KE GYSW+EV+NQVHKFHVGDTSHPQA++IY
Sbjct: 655 ILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIY 714

Query: 181 EELDELALKI 210
           +ELDELALKI
Sbjct: 715 DELDELALKI 724


>ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355506477|gb|AES87619.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/70 (82%), Positives = 68/70 (97%)
 Frame = +1

Query: 1   VLLSNLYASEGRWDDVAAIRKSMKQRKITKEAGYSWVEVENQVHKFHVGDTSHPQAQEIY 180
           +LLSNLYA+EGRW+DVAAIRK+MKQ++ITKEAG SW+EVENQVHKFHVGDT HP+AQ+IY
Sbjct: 674 ILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIY 733

Query: 181 EELDELALKI 210
           E+LDELALKI
Sbjct: 734 EKLDELALKI 743


>ref|XP_002321443.1| predicted protein [Populus trichocarpa] gi|222868439|gb|EEF05570.1|
           predicted protein [Populus trichocarpa]
          Length = 723

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/70 (75%), Positives = 65/70 (92%)
 Frame = +1

Query: 1   VLLSNLYASEGRWDDVAAIRKSMKQRKITKEAGYSWVEVENQVHKFHVGDTSHPQAQEIY 180
           +LLSNL+AS G+W++VA IRK MK+R +TKEAG SW+EVEN+VHKF+VGDTSHPQAQEIY
Sbjct: 558 ILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIY 617

Query: 181 EELDELALKI 210
           +ELD+LALKI
Sbjct: 618 DELDQLALKI 627


>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/70 (70%), Positives = 61/70 (87%)
 Frame = +1

Query: 1   VLLSNLYASEGRWDDVAAIRKSMKQRKITKEAGYSWVEVENQVHKFHVGDTSHPQAQEIY 180
           +LLSNL+AS G+W DV  IRKSMK+R + KEAG SW+EVEN+VH+FHVG+TSHPQA +IY
Sbjct: 644 ILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIY 703

Query: 181 EELDELALKI 210
           +ELD+LA KI
Sbjct: 704 QELDQLASKI 713


>ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/70 (70%), Positives = 61/70 (87%)
 Frame = +1

Query: 1   VLLSNLYASEGRWDDVAAIRKSMKQRKITKEAGYSWVEVENQVHKFHVGDTSHPQAQEIY 180
           +LLSNL+AS G+W DV  IRKSMK+R + KEAG SW+EVEN+VH+FHVG+TSHPQA +IY
Sbjct: 464 ILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIY 523

Query: 181 EELDELALKI 210
           +ELD+LA KI
Sbjct: 524 QELDQLASKI 533


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