BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00027006
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containi...   150   2e-34
ref|XP_003538888.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   147   2e-33
ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ...   146   2e-33
emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]    87   2e-15
ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12

>ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Glycine max]
          Length = 579

 Score =  150 bits (378), Expect = 2e-34
 Identities = 74/104 (71%), Positives = 84/104 (80%)
 Frame = -3

Query: 313 FEALLHTSCQSARHLLQIQALLITSTLSRNPFLSRTLLSRASHLCDVAFALLIFRHLNKD 134
           FEALL  SCQ+ARHLLQIQALL+TS+L RNP+L+RT+LSRASHLCDVA+  +IFR +N  
Sbjct: 43  FEALLQNSCQNARHLLQIQALLVTSSLFRNPYLARTILSRASHLCDVAYTRVIFRSINS- 101

Query: 133 PSDTFCVNTVIHAYCNSHVPHNAPLFYFRSLKNRFFPNSYTFVP 2
             DTFCVN VI AY NSH P  A +FYFRSL   FFPNSYTFVP
Sbjct: 102 -LDTFCVNIVIQAYSNSHAPREAIVFYFRSLMRGFFPNSYTFVP 144


>ref|XP_003538888.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g51320-like [Glycine max]
          Length = 560

 Score =  147 bits (370), Expect = 2e-33
 Identities = 72/104 (69%), Positives = 85/104 (81%)
 Frame = -3

Query: 313 FEALLHTSCQSARHLLQIQALLITSTLSRNPFLSRTLLSRASHLCDVAFALLIFRHLNKD 134
           F+ALL  SC++ARHLLQ+QALL+TS+L RNPFL+RT+LSRASHLC+ A+ LLIFR +N  
Sbjct: 60  FDALLQNSCRNARHLLQMQALLVTSSLFRNPFLARTVLSRASHLCNFAYTLLIFRTINS- 118

Query: 133 PSDTFCVNTVIHAYCNSHVPHNAPLFYFRSLKNRFFPNSYTFVP 2
              TFCVNTVI +YCNSH P  A +FYFRSL   FFPNSYTFVP
Sbjct: 119 -LGTFCVNTVIKSYCNSHAPREAIVFYFRSLMCGFFPNSYTFVP 161


>ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513563|gb|AES95186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score =  146 bits (369), Expect = 2e-33
 Identities = 85/166 (51%), Positives = 100/166 (60%), Gaps = 1/166 (0%)
 Frame = -3

Query: 499 MARVSFTRQLVPFRTTLFKRXXXXXXXXXXXXXXXXXXXXXXXPFVSEEKRTSSVLIFTP 320
           MAR+ ++R   PFR   F R                          S    + S    T 
Sbjct: 1   MARI-YSRNFFPFRNPFFSRP-----------------------ITSSSSSSPSSQFLTH 36

Query: 319 LQFEALLHTS-CQSARHLLQIQALLITSTLSRNPFLSRTLLSRASHLCDVAFALLIFRHL 143
           L F++LL  S CQ+  HLLQIQ+LLITS+  RNPFLSRTLLSRAS+LC V F  LIF H 
Sbjct: 37  LHFQSLLQPSHCQTTHHLLQIQSLLITSSFYRNPFLSRTLLSRASNLCTVDFTFLIFHHF 96

Query: 142 NKDPSDTFCVNTVIHAYCNSHVPHNAPLFYFRSLKNRFFPNSYTFV 5
           N +P DTFCVNTVI++YCNS+VPH A +FYF SLK  FF NSYTFV
Sbjct: 97  N-NPLDTFCVNTVINSYCNSYVPHKAIVFYFSSLKIGFFANSYTFV 141


>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 50/102 (49%), Positives = 64/102 (62%)
 Frame = -3

Query: 307 ALLHTSCQSARHLLQIQALLITSTLSRNPFLSRTLLSRASHLCDVAFALLIFRHLNKDPS 128
           ALL T C++ R L QIQA LI S L R PF++  +L  ++   DV + +LIFR +  D  
Sbjct: 377 ALLKT-CRNMRQLSQIQAYLIISGLFRKPFVASKVLKVSADYADVNYTILIFRSI--DSP 433

Query: 127 DTFCVNTVIHAYCNSHVPHNAPLFYFRSLKNRFFPNSYTFVP 2
           DT CVN VI AY  S V H A +FYF +L+N F  NS+TF P
Sbjct: 434 DTVCVNAVIKAYSISSVAHQALVFYFETLRNGFMCNSFTFPP 475


>ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Cucumis sativus]
          Length = 575

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 46/96 (47%), Positives = 57/96 (59%)
 Frame = -3

Query: 292 SCQSARHLLQIQALLITSTLSRNPFLSRTLLSRASHLCDVAFALLIFRHLNKDPSDTFCV 113
           SCQS R L Q    LITS L  + F +  +L +AS   D+ + +LIFRH+ K P +TFCV
Sbjct: 58  SCQSVRELFQFHGHLITSGLFNDHFWANRVLLQASEFGDIVYTVLIFRHI-KVP-NTFCV 115

Query: 112 NTVIHAYCNSHVPHNAPLFYFRSLKNRFFPNSYTFV 5
           N VI AY  S VP  A   YF  L N   P+SYTF+
Sbjct: 116 NRVIKAYSLSTVPLEAVFVYFEWLGNGLRPDSYTFL 151