BLASTX nr result

ID: Glycyrrhiza24_contig00026978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026978
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526066.1| PREDICTED: myosin-H heavy chain-like [Glycin...   120   2e-25
ref|XP_003603220.1| Myosin-like protein [Medicago truncatula] gi...   113   2e-23
ref|XP_003523654.1| PREDICTED: myosin-Va-like [Glycine max]           112   3e-23
ref|XP_003545389.1| PREDICTED: myosin-H heavy chain-like [Glycin...   106   2e-21
ref|XP_002309459.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18

>ref|XP_003526066.1| PREDICTED: myosin-H heavy chain-like [Glycine max]
          Length = 1521

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/75 (78%), Positives = 67/75 (89%)
 Frame = -1

Query: 230 VLDNAAKCIQRRLHTFIARRDFMSIRAAAILLQACCRGCLIRKIYVSKRETAAAISIQKY 51
           VLDNAAKCIQRRL TFIARRDF+SI+AAA+ +QACCRGC+ RKIY SKRETAAAISIQKY
Sbjct: 736 VLDNAAKCIQRRLRTFIARRDFISIQAAALSIQACCRGCIGRKIYASKRETAAAISIQKY 795

Query: 50  IRMRLMRHACDTIFF 6
           IRM LMRHA   +++
Sbjct: 796 IRMCLMRHAYVKLYY 810


>ref|XP_003603220.1| Myosin-like protein [Medicago truncatula]
           gi|355492268|gb|AES73471.1| Myosin-like protein
           [Medicago truncatula]
          Length = 1621

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/74 (79%), Positives = 63/74 (85%)
 Frame = -1

Query: 230 VLDNAAKCIQRRLHTFIARRDFMSIRAAAILLQACCRGCLIRKIYVSKRETAAAISIQKY 51
           VLDNAAK IQRRL TFIA RDF+SIRAAA+ LQACCRGCL RKIY SKRETAAAISIQKY
Sbjct: 733 VLDNAAKFIQRRLRTFIAHRDFISIRAAAVSLQACCRGCLARKIYASKRETAAAISIQKY 792

Query: 50  IRMRLMRHACDTIF 9
           IRM  MR A  T++
Sbjct: 793 IRMCQMRCAYMTLY 806


>ref|XP_003523654.1| PREDICTED: myosin-Va-like [Glycine max]
          Length = 1519

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/75 (74%), Positives = 65/75 (86%)
 Frame = -1

Query: 230 VLDNAAKCIQRRLHTFIARRDFMSIRAAAILLQACCRGCLIRKIYVSKRETAAAISIQKY 51
           VLDNAAKCIQRRL TFIARRDF+SI+AAA+ LQACCRG + RK+Y SKRET+AAISIQKY
Sbjct: 731 VLDNAAKCIQRRLRTFIARRDFISIQAAALSLQACCRGFIGRKLYASKRETSAAISIQKY 790

Query: 50  IRMRLMRHACDTIFF 6
           IRM  MRHA   +++
Sbjct: 791 IRMCWMRHAYVKLYY 805


>ref|XP_003545389.1| PREDICTED: myosin-H heavy chain-like [Glycine max]
          Length = 1588

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/75 (73%), Positives = 61/75 (81%)
 Frame = -1

Query: 230  VLDNAAKCIQRRLHTFIARRDFMSIRAAAILLQACCRGCLIRKIYVSKRETAAAISIQKY 51
            VLDNAAK IQRRL TFIA RDF+  RAAA  LQACCRG + RKIY +KRETAAAISIQKY
Sbjct: 797  VLDNAAKYIQRRLRTFIAHRDFILARAAAFSLQACCRGYIARKIYAAKRETAAAISIQKY 856

Query: 50   IRMRLMRHACDTIFF 6
            IRM L+RHA   ++F
Sbjct: 857  IRMWLVRHAYFKLYF 871


>ref|XP_002309459.1| predicted protein [Populus trichocarpa] gi|222855435|gb|EEE92982.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/69 (69%), Positives = 56/69 (81%)
 Frame = -1

Query: 230 VLDNAAKCIQRRLHTFIARRDFMSIRAAAILLQACCRGCLIRKIYVSKRETAAAISIQKY 51
           VLD AAK IQR+LHTFIARRDF S RAAA  +Q+ CRGCL RK++ +KRE AAAISIQKY
Sbjct: 158 VLDGAAKRIQRQLHTFIARRDFFSTRAAAFAIQSYCRGCLARKMFAAKRERAAAISIQKY 217

Query: 50  IRMRLMRHA 24
           +R  L+R A
Sbjct: 218 VRKWLLRRA 226


Top