BLASTX nr result

ID: Glycyrrhiza24_contig00026974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026974
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36838.1| unknown [Medicago truncatula]                          128   4e-28
ref|XP_003549035.1| PREDICTED: WW domain-containing oxidoreducta...   117   1e-24
ref|XP_003548175.1| PREDICTED: WW domain-containing oxidoreducta...   110   9e-23
ref|XP_003536459.1| PREDICTED: WW domain-containing oxidoreducta...   109   2e-22
ref|XP_003533177.1| PREDICTED: WW domain-containing oxidoreducta...   109   3e-22

>gb|AFK36838.1| unknown [Medicago truncatula]
          Length = 324

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/84 (73%), Positives = 71/84 (84%)
 Frame = -1

Query: 254 SYQRWKAYGQSKLANILHANELARYLKKDGVDITANSIHPGGIRTNIVSPEVGRTIPADF 75
           SYQRW+AYGQSKLAN LHANELAR  K+DGV ITANS+HPG I TNIVS EVG+T+P D 
Sbjct: 199 SYQRWRAYGQSKLANTLHANELARNFKEDGVGITANSLHPGCIGTNIVSREVGQTMPLDL 258

Query: 74  LNVLGKLEIKSVQQGAATTCYVAL 3
              LGK+ +K++QQGAATTCYVAL
Sbjct: 259 RKSLGKIVVKTIQQGAATTCYVAL 282


>ref|XP_003549035.1| PREDICTED: WW domain-containing oxidoreductase-like [Glycine max]
          Length = 310

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/84 (67%), Positives = 68/84 (80%)
 Frame = -1

Query: 254 SYQRWKAYGQSKLANILHANELARYLKKDGVDITANSIHPGGIRTNIVSPEVGRTIPADF 75
           SYQ+W+AYGQSKLANILHANELAR LK+DG+DITANS+HPG I TNI  PE+      + 
Sbjct: 185 SYQKWRAYGQSKLANILHANELARLLKEDGIDITANSLHPGAIITNIYKPEL------NL 238

Query: 74  LNVLGKLEIKSVQQGAATTCYVAL 3
           +N+LG   +KS+ QGAATTCYVAL
Sbjct: 239 MNMLGDYLLKSIPQGAATTCYVAL 262


>ref|XP_003548175.1| PREDICTED: WW domain-containing oxidoreductase-like [Glycine max]
          Length = 314

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/84 (67%), Positives = 64/84 (76%)
 Frame = -1

Query: 254 SYQRWKAYGQSKLANILHANELARYLKKDGVDITANSIHPGGIRTNIVSPEVGRTIPADF 75
           SY  W AYGQSKLANILHANELAR LK+DGVDITANS+HPG I TNI       ++ A  
Sbjct: 192 SYHNWLAYGQSKLANILHANELARRLKQDGVDITANSLHPGAIVTNIFR---HTSVLAGI 248

Query: 74  LNVLGKLEIKSVQQGAATTCYVAL 3
           +N LG+   K+VQQGAATTCYVAL
Sbjct: 249 INTLGRFVFKNVQQGAATTCYVAL 272


>ref|XP_003536459.1| PREDICTED: WW domain-containing oxidoreductase-like [Glycine max]
          Length = 313

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/84 (65%), Positives = 65/84 (77%)
 Frame = -1

Query: 254 SYQRWKAYGQSKLANILHANELARYLKKDGVDITANSIHPGGIRTNIVSPEVGRTIPADF 75
           SY  W+AYGQSKLANILHANEL R LK+DGVDI+ANS+HPG I TN+       +     
Sbjct: 191 SYNNWRAYGQSKLANILHANELTRRLKEDGVDISANSLHPGTITTNLFR---HNSAVNGL 247

Query: 74  LNVLGKLEIKSVQQGAATTCYVAL 3
           +NV+GKL +K+VQQGAATTCYVAL
Sbjct: 248 INVIGKLVLKNVQQGAATTCYVAL 271


>ref|XP_003533177.1| PREDICTED: WW domain-containing oxidoreductase-like [Glycine max]
          Length = 314

 Score =  109 bits (272), Expect = 3e-22
 Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
 Frame = -1

Query: 254 SYQRWKAYGQSKLANILHANELARYLKKDGVD-ITANSIHPGGIR-TNIVSPEVGRTIPA 81
           SYQ+W AYGQSKLANILHANEL R LK+DG+D ITANS+HPG I  TNI  PE+      
Sbjct: 185 SYQKWHAYGQSKLANILHANELTRLLKEDGIDNITANSLHPGAIMDTNIYKPEIN----- 239

Query: 80  DFLNVLGKLEIKSVQQGAATTCYVAL 3
           D +N LG   +K++QQGAATTCYVAL
Sbjct: 240 DLINRLGSFLLKNIQQGAATTCYVAL 265


Top