BLASTX nr result

ID: Glycyrrhiza24_contig00026972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026972
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago t...    62   6e-08
ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago t...    62   6e-08

>ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355523910|gb|AET04364.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 515

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/76 (47%), Positives = 42/76 (55%)
 Frame = -1

Query: 231 STHSHSHKSLSVFNQMLTTGVRPNSHTFTALAKACACVSLSSLQQVRAQAMKXXXXXXXX 52
           +T+S  HK   VF +ML T +RPNSHTFT L K  ACVSLSSL+QV   +MK        
Sbjct: 64  TTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVK--ACVSLSSLEQVFTLSMKLGNSSDVY 121

Query: 51  XXXXXXXXXSKHGEIH 4
                    SKH  IH
Sbjct: 122 FVSSVINAFSKHSAIH 137


>ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355492766|gb|AES73969.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 629

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/76 (47%), Positives = 43/76 (56%)
 Frame = -1

Query: 231 STHSHSHKSLSVFNQMLTTGVRPNSHTFTALAKACACVSLSSLQQVRAQAMKXXXXXXXX 52
           +T+S   KSLSVF +ML   +RPNSHTFT L K  +CV+LSSL+QV    MK        
Sbjct: 100 TTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVK--SCVTLSSLEQVFTLTMKSGNSSDVY 157

Query: 51  XXXXXXXXXSKHGEIH 4
                    SKHG IH
Sbjct: 158 FVSSVINVFSKHGAIH 173


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