BLASTX nr result

ID: Glycyrrhiza24_contig00026971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026971
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554472.1| PREDICTED: trafficking protein particle comp...   147   1e-33
ref|XP_003554471.1| PREDICTED: trafficking protein particle comp...   147   1e-33
ref|XP_003554470.1| PREDICTED: trafficking protein particle comp...   147   1e-33
ref|XP_003520717.1| PREDICTED: trafficking protein particle comp...   145   4e-33
ref|XP_002524067.1| conserved hypothetical protein [Ricinus comm...   111   5e-23

>ref|XP_003554472.1| PREDICTED: trafficking protein particle complex subunit 8-like
           isoform 3 [Glycine max]
          Length = 1257

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/81 (87%), Positives = 75/81 (92%)
 Frame = +2

Query: 2   ASTREGLWHSLEEEMIPSFSAAKANWLELQSKLIPKKHSQSNVCVAGEAVKVNIEFINPL 181
           A+TREGLW SLEEEM+PSFSAAK NWLELQSKLIPKKHSQSNVCV GEAV VNIEF NPL
Sbjct: 573 ANTREGLWRSLEEEMLPSFSAAKTNWLELQSKLIPKKHSQSNVCVVGEAVTVNIEFKNPL 632

Query: 182 QISIPISGVALICKYSASTDE 244
           QISIPISGV L+CKYSASTD+
Sbjct: 633 QISIPISGVTLVCKYSASTDD 653


>ref|XP_003554471.1| PREDICTED: trafficking protein particle complex subunit 8-like
           isoform 2 [Glycine max]
          Length = 1254

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/81 (87%), Positives = 75/81 (92%)
 Frame = +2

Query: 2   ASTREGLWHSLEEEMIPSFSAAKANWLELQSKLIPKKHSQSNVCVAGEAVKVNIEFINPL 181
           A+TREGLW SLEEEM+PSFSAAK NWLELQSKLIPKKHSQSNVCV GEAV VNIEF NPL
Sbjct: 570 ANTREGLWRSLEEEMLPSFSAAKTNWLELQSKLIPKKHSQSNVCVVGEAVTVNIEFKNPL 629

Query: 182 QISIPISGVALICKYSASTDE 244
           QISIPISGV L+CKYSASTD+
Sbjct: 630 QISIPISGVTLVCKYSASTDD 650


>ref|XP_003554470.1| PREDICTED: trafficking protein particle complex subunit 8-like
           isoform 1 [Glycine max]
          Length = 1283

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/81 (87%), Positives = 75/81 (92%)
 Frame = +2

Query: 2   ASTREGLWHSLEEEMIPSFSAAKANWLELQSKLIPKKHSQSNVCVAGEAVKVNIEFINPL 181
           A+TREGLW SLEEEM+PSFSAAK NWLELQSKLIPKKHSQSNVCV GEAV VNIEF NPL
Sbjct: 599 ANTREGLWRSLEEEMLPSFSAAKTNWLELQSKLIPKKHSQSNVCVVGEAVTVNIEFKNPL 658

Query: 182 QISIPISGVALICKYSASTDE 244
           QISIPISGV L+CKYSASTD+
Sbjct: 659 QISIPISGVTLVCKYSASTDD 679


>ref|XP_003520717.1| PREDICTED: trafficking protein particle complex subunit 8-like
           [Glycine max]
          Length = 1289

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/81 (86%), Positives = 75/81 (92%)
 Frame = +2

Query: 2   ASTREGLWHSLEEEMIPSFSAAKANWLELQSKLIPKKHSQSNVCVAGEAVKVNIEFINPL 181
           A+TREGLWHSLEEEM+PSFS+AK NWLELQSKLI KKHSQSNVCVAGEAV VNIEF NPL
Sbjct: 605 ANTREGLWHSLEEEMLPSFSSAKTNWLELQSKLISKKHSQSNVCVAGEAVNVNIEFKNPL 664

Query: 182 QISIPISGVALICKYSASTDE 244
           QISIPISGV L+CKYSAST +
Sbjct: 665 QISIPISGVTLVCKYSASTGD 685


>ref|XP_002524067.1| conserved hypothetical protein [Ricinus communis]
           gi|223536635|gb|EEF38277.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1284

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/80 (65%), Positives = 64/80 (80%)
 Frame = +2

Query: 2   ASTREGLWHSLEEEMIPSFSAAKANWLELQSKLIPKKHSQSNVCVAGEAVKVNIEFINPL 181
           AS RE +W SLEE+MIPS SAAK+NWLELQSK++PK    +N+CVAGEA+KV IEF NPL
Sbjct: 601 ASVRESVWRSLEEDMIPSLSAAKSNWLELQSKVVPKSFKDANICVAGEAIKVRIEFQNPL 660

Query: 182 QISIPISGVALICKYSASTD 241
           +I I +S V+LIC+ S S D
Sbjct: 661 KIPISLSSVSLICELSGSDD 680


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