BLASTX nr result

ID: Glycyrrhiza24_contig00026949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026949
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [...   107   1e-21
ref|XP_003543036.1| PREDICTED: zinc finger CCCH domain-containin...   102   3e-20
ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containin...    99   3e-19
ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_004155642.1| PREDICTED: uncharacterized protein LOC101231...    80   2e-13

>ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355482671|gb|AES63874.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 892

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/61 (85%), Positives = 58/61 (95%)
 Frame = +2

Query: 2    EGRLSKDAHIMIVKKSVDKVVSTLEPHQIPTTEDSAQQYVSSCRMKIAKLVNGYVNKYGK 181
            EGRLSKDAHI+IVKKSVDKV+STLEP QIPTTED+A+QYVS CR KIAKLV+GYVNK+GK
Sbjct: 832  EGRLSKDAHILIVKKSVDKVISTLEPRQIPTTEDTAKQYVSLCRPKIAKLVHGYVNKHGK 891

Query: 182  S 184
            S
Sbjct: 892  S 892


>ref|XP_003543036.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
           isoform 1 [Glycine max] gi|356549311|ref|XP_003543037.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           27-like isoform 2 [Glycine max]
          Length = 98

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/61 (85%), Positives = 57/61 (93%)
 Frame = +2

Query: 2   EGRLSKDAHIMIVKKSVDKVVSTLEPHQIPTTEDSAQQYVSSCRMKIAKLVNGYVNKYGK 181
           EGRLSKD HIMIVKKSVDKVV+TLEPHQIPT  D+A+QYVSS ++KIAKLVNGYVNKYGK
Sbjct: 39  EGRLSKDTHIMIVKKSVDKVVNTLEPHQIPTI-DTAKQYVSSSQVKIAKLVNGYVNKYGK 97

Query: 182 S 184
           S
Sbjct: 98  S 98


>ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
           [Glycine max]
          Length = 713

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/60 (85%), Positives = 55/60 (91%)
 Frame = +2

Query: 2   EGRLSKDAHIMIVKKSVDKVVSTLEPHQIPTTEDSAQQYVSSCRMKIAKLVNGYVNKYGK 181
           EG LSKDAHIMIVKKSVDKVVSTLEPHQIP   D+A+QYVSS ++KIAKLVNGYVNKYGK
Sbjct: 654 EGHLSKDAHIMIVKKSVDKVVSTLEPHQIPIM-DTAKQYVSSSQVKIAKLVNGYVNKYGK 712


>ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|222870892|gb|EEF08023.1|
           predicted protein [Populus trichocarpa]
          Length = 669

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/61 (67%), Positives = 52/61 (85%)
 Frame = +2

Query: 2   EGRLSKDAHIMIVKKSVDKVVSTLEPHQIPTTEDSAQQYVSSCRMKIAKLVNGYVNKYGK 181
           EG LSKDAH  IVKK+V+KV+STL+PHQIP T +S +QY+SS + K+AKLV GY++KYGK
Sbjct: 609 EGHLSKDAHNTIVKKTVEKVLSTLQPHQIPATVESIKQYLSSSQPKMAKLVEGYISKYGK 668

Query: 182 S 184
           S
Sbjct: 669 S 669


>ref|XP_004155642.1| PREDICTED: uncharacterized protein LOC101231580 [Cucumis sativus]
          Length = 738

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/61 (60%), Positives = 46/61 (75%)
 Frame = +2

Query: 2   EGRLSKDAHIMIVKKSVDKVVSTLEPHQIPTTEDSAQQYVSSCRMKIAKLVNGYVNKYGK 181
           EG L KD H  +VKK+ DKV+  L+ HQ+PTT +S +QY+SS R KI KLV GYV+KYGK
Sbjct: 678 EGHLKKDVHNTVVKKTFDKVLGALQSHQVPTTVESVKQYLSSSRPKIEKLVEGYVSKYGK 737

Query: 182 S 184
           S
Sbjct: 738 S 738


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