BLASTX nr result

ID: Glycyrrhiza24_contig00026945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026945
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637388.1| Stem-specific protein TSJT1 [Medicago trunca...   129   2e-28
ref|XP_003542759.1| PREDICTED: stem-specific protein TSJT1-like ...    89   3e-16
ref|XP_003542758.1| PREDICTED: stem-specific protein TSJT1-like ...    86   4e-15
ref|XP_003529315.1| PREDICTED: stem-specific protein TSJT1-like ...    79   3e-13
ref|XP_003529316.1| PREDICTED: stem-specific protein TSJT1-like ...    78   7e-13

>ref|XP_003637388.1| Stem-specific protein TSJT1 [Medicago truncatula]
           gi|355503323|gb|AES84526.1| Stem-specific protein TSJT1
           [Medicago truncatula]
          Length = 318

 Score =  129 bits (325), Expect = 2e-28
 Identities = 74/115 (64%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
 Frame = -3

Query: 338 LIALLILVHFFEKVYTLLGEEKKGKVVELIENLDPKKVEATMLGIFKEKLVNPPKELISP 159
           LIALLILVHFFEK+YTLLGE+K+ KVV L ENL+    E  MLGIF +KLVNPP+EL SP
Sbjct: 24  LIALLILVHFFEKIYTLLGEDKRKKVVTLEENLN-LSTETKMLGIFTKKLVNPPQELNSP 82

Query: 158 ASLNSSKMSKLPDEILQGXXXXXXXXXXXXXFGNDAFLAYSPSN---KHHGWFCG 3
           A LNSS  SKLP EIL               FGNDA LAYSPSN   KHHG FCG
Sbjct: 83  APLNSSNKSKLPHEILHDFTSFNPSNAFSLNFGNDAILAYSPSNNTSKHHGLFCG 137


>ref|XP_003542759.1| PREDICTED: stem-specific protein TSJT1-like isoform 2 [Glycine max]
          Length = 258

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 49/73 (67%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
 Frame = -3

Query: 215 MLGIFKEKLVNPPKELISPASLNSSKMSKLPDEILQGXXXXXXXXXXXXXFGNDAFLAYS 36
           MLGIFK+KLVNPP+EL SPASLNSSK SKLP+EILQ              FGNDA LAYS
Sbjct: 1   MLGIFKDKLVNPPEELNSPASLNSSKRSKLPNEILQEFQSYNPSNAFSVSFGNDALLAYS 60

Query: 35  PSNK---HHGWFC 6
           PSNK   HHG FC
Sbjct: 61  PSNKASIHHGLFC 73


>ref|XP_003542758.1| PREDICTED: stem-specific protein TSJT1-like isoform 1 [Glycine max]
          Length = 257

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/73 (67%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
 Frame = -3

Query: 215 MLGIFKEKLVNPPKELISPASLNSSKMSKLPDEILQGXXXXXXXXXXXXXFGNDAFLAYS 36
           MLGIFK+KLVNPP+EL SPASLNSSK SKLP+EILQ              FGNDA LAYS
Sbjct: 1   MLGIFKDKLVNPPEELNSPASLNSSKRSKLPNEILQEFQSYNPSNAFSVSFGNDALLAYS 60

Query: 35  PSNK---HHGWFC 6
           PSNK   HHG FC
Sbjct: 61  PSNKASIHHG-FC 72


>ref|XP_003529315.1| PREDICTED: stem-specific protein TSJT1-like isoform 1 [Glycine max]
          Length = 254

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/72 (62%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
 Frame = -3

Query: 215 MLGIFKEKLVNPPKELISPASLNSSKMSKLPDEILQGXXXXXXXXXXXXXFGNDAFLAYS 36
           ML IFK+ LVNPP+EL SPASLNSSK SKLP+EILQ              FGNDA LAYS
Sbjct: 1   MLAIFKDNLVNPPEELNSPASLNSSKRSKLPNEILQEFQSYNPSNAFSMSFGNDALLAYS 60

Query: 35  PSNKH--HGWFC 6
           PSNK   H  FC
Sbjct: 61  PSNKPSIHNGFC 72


>ref|XP_003529316.1| PREDICTED: stem-specific protein TSJT1-like isoform 2 [Glycine max]
          Length = 261

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 44/71 (61%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
 Frame = -3

Query: 215 MLGIFKEKLVNPPKELISPASLNSSKMSKLPDEILQGXXXXXXXXXXXXXFGNDAFLAYS 36
           ML IFK+ LVNPP+EL SPASLNSSK SKLP+EILQ              FGNDA LAYS
Sbjct: 1   MLAIFKDNLVNPPEELNSPASLNSSKRSKLPNEILQEFQSYNPSNAFSMSFGNDALLAYS 60

Query: 35  PSNK---HHGW 12
           PSNK   H+G+
Sbjct: 61  PSNKPSIHNGY 71


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