BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026933
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-li...    99   3e-19
ref|XP_003523440.1| PREDICTED: replication factor C subunit 5-li...    96   2e-18
ref|XP_003602039.1| Replication factor C subunit [Medicago trunc...    81   1e-13
ref|NP_177871.1| replication factor C subunit 3 [Arabidopsis tha...    78   9e-13
ref|XP_002889143.1| hypothetical protein ARALYDRAFT_476911 [Arab...    75   4e-12

>ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-like [Glycine max]
          Length = 361

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 52/67 (77%), Positives = 57/67 (85%)
 Frame = +3

Query: 177 MAESTHPMEIDGDDLTPSARHDKGKSVVVVAAGNPPFAGKAIPWVEKYRPQSLDDVAAHR 356
           MA++THPM+ID  D T +A  DKGKSVV   AGNPP AGKAIPWVEKYRPQSLDDVAAHR
Sbjct: 1   MAQTTHPMDID--DHTYTASPDKGKSVVF--AGNPPAAGKAIPWVEKYRPQSLDDVAAHR 56

Query: 357 DIVETID 377
           DIV+TID
Sbjct: 57  DIVDTID 63


>ref|XP_003523440.1| PREDICTED: replication factor C subunit 5-like [Glycine max]
          Length = 363

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/67 (74%), Positives = 54/67 (80%)
 Frame = +3

Query: 177 MAESTHPMEIDGDDLTPSARHDKGKSVVVVAAGNPPFAGKAIPWVEKYRPQSLDDVAAHR 356
           MAE+ H M+ID DD T +AR DK KSVVV  A NP  AGKAIPWVEKYRP SLDDVAAHR
Sbjct: 1   MAETNHHMDIDSDDHTYTARPDKAKSVVV--ASNPAAAGKAIPWVEKYRPLSLDDVAAHR 58

Query: 357 DIVETID 377
           DIV+TID
Sbjct: 59  DIVDTID 65


>ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
           gi|355491087|gb|AES72290.1| Replication factor C subunit
           [Medicago truncatula]
          Length = 355

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/67 (65%), Positives = 49/67 (73%)
 Frame = +3

Query: 177 MAESTHPMEIDGDDLTPSARHDKGKSVVVVAAGNPPFAGKAIPWVEKYRPQSLDDVAAHR 356
           MAE T+ M+ID  D        KGK+V+  AAGNP F GKA  WVEKYRPQSLDDVAAHR
Sbjct: 1   MAEETYAMDIDVTD--------KGKTVI--AAGNPSFGGKASLWVEKYRPQSLDDVAAHR 50

Query: 357 DIVETID 377
           DIV+TID
Sbjct: 51  DIVDTID 57


>ref|NP_177871.1| replication factor C subunit 3 [Arabidopsis thaliana]
           gi|12323400|gb|AAG51681.1|AC010704_25 putative
           replication factor C; 24844-22715 [Arabidopsis thaliana]
           gi|17529332|gb|AAL38893.1| putative replication factor C
           [Arabidopsis thaliana] gi|21436375|gb|AAM51357.1|
           putative replication factor C [Arabidopsis thaliana]
           gi|332197861|gb|AEE35982.1| replication factor C subunit
           3 [Arabidopsis thaliana]
          Length = 369

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/67 (59%), Positives = 46/67 (68%)
 Frame = +3

Query: 177 MAESTHPMEIDGDDLTPSARHDKGKSVVVVAAGNPPFAGKAIPWVEKYRPQSLDDVAAHR 356
           M E T  M+ID D++ P    +KGK VV      PP   KA PWVEKYRPQSLDDVAAHR
Sbjct: 1   MTELTSAMDIDVDEIQPRKPINKGKDVV---GFGPPPQSKATPWVEKYRPQSLDDVAAHR 57

Query: 357 DIVETID 377
           DI++TID
Sbjct: 58  DIIDTID 64


>ref|XP_002889143.1| hypothetical protein ARALYDRAFT_476911 [Arabidopsis lyrata subsp.
           lyrata] gi|297334984|gb|EFH65402.1| hypothetical protein
           ARALYDRAFT_476911 [Arabidopsis lyrata subsp. lyrata]
          Length = 369

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/67 (59%), Positives = 46/67 (68%)
 Frame = +3

Query: 177 MAESTHPMEIDGDDLTPSARHDKGKSVVVVAAGNPPFAGKAIPWVEKYRPQSLDDVAAHR 356
           M E T  M+ID D++ P    +KGK V     G PP   KA PWVEKYRPQSLDDVAAHR
Sbjct: 1   MTEITSAMDIDVDEIQPRKPINKGKDVA--GFGAPP-QSKATPWVEKYRPQSLDDVAAHR 57

Query: 357 DIVETID 377
           DI++TID
Sbjct: 58  DIIDTID 64