BLASTX nr result

ID: Glycyrrhiza24_contig00026929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026929
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599197.1| F-box family protein [Medicago truncatula] g...   156   1e-36
ref|XP_003537158.1| PREDICTED: F-box protein SKIP23-like [Glycin...   147   1e-33
ref|XP_003602302.1| F-box family protein [Medicago truncatula] g...   140   1e-31
ref|XP_003599239.1| F-box protein [Medicago truncatula] gi|35548...   137   9e-31
ref|XP_003591727.1| F-box protein [Medicago truncatula] gi|35834...   135   3e-30

>ref|XP_003599197.1| F-box family protein [Medicago truncatula]
           gi|355488245|gb|AES69448.1| F-box family protein
           [Medicago truncatula]
          Length = 423

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/111 (67%), Positives = 90/111 (81%)
 Frame = +3

Query: 36  EIYGVGWERAVRFDVFRLEEKEKRWVELTSLGDRVLFLGDDCAFSASASDLCVAKGNCVI 215
           EI+ +G ERAVRFDVFRL+EKEK+WVE+ +LGD VLFLG++CAFSASASDLC+  GNCVI
Sbjct: 315 EIFRIGSERAVRFDVFRLDEKEKKWVEVRNLGDMVLFLGEECAFSASASDLCIGNGNCVI 374

Query: 216 FRDDSFGGVNGNAIECGMRVFHLDQGRISPLSDYPGYSELFWPIPDWVRSH 368
           FRD      + ++ E G RVFHLDQ RISPLSD+P YS+LFWP P+WV  H
Sbjct: 375 FRDYVLN--DFHSTEVGNRVFHLDQRRISPLSDFPIYSKLFWPPPEWVGLH 423


>ref|XP_003537158.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 368

 Score =  147 bits (370), Expect = 1e-33
 Identities = 70/108 (64%), Positives = 85/108 (78%)
 Frame = +3

Query: 36  EIYGVGWERAVRFDVFRLEEKEKRWVELTSLGDRVLFLGDDCAFSASASDLCVAKGNCVI 215
           ++ G+GWER V+FDVFRL+E+ K+WVELT LG+RVLFLGDDCAFSASA DL + +GNCV 
Sbjct: 261 DVAGMGWERTVKFDVFRLDEEGKKWVELTDLGERVLFLGDDCAFSASAKDLNLGRGNCVA 320

Query: 216 FRDDSFGGVNGNAIECGMRVFHLDQGRISPLSDYPGYSELFWPIPDWV 359
           FRDD   G+  N +  GM VF LD G+ISPLS+  G+SELF P PDWV
Sbjct: 321 FRDD---GLGFNRVLNGMGVFRLDDGKISPLSECAGFSELFCPPPDWV 365


>ref|XP_003602302.1| F-box family protein [Medicago truncatula]
           gi|355491350|gb|AES72553.1| F-box family protein
           [Medicago truncatula]
          Length = 434

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/106 (63%), Positives = 82/106 (77%)
 Frame = +3

Query: 42  YGVGWERAVRFDVFRLEEKEKRWVELTSLGDRVLFLGDDCAFSASASDLCVAKGNCVIFR 221
           +G   E  ++ DVFRL+EKEK+WV+L SLGDRVLFLG+ C+FSASASDL V KGNCVIF 
Sbjct: 295 FGFPGEDGLKLDVFRLDEKEKKWVKLASLGDRVLFLGNGCSFSASASDLSVVKGNCVIFS 354

Query: 222 DDSFGGVNGNAIECGMRVFHLDQGRISPLSDYPGYSELFWPIPDWV 359
           DD+F   + + + CGM VFHLDQ  +SPLSDYP YS  FWP P+W+
Sbjct: 355 DDAF--YDFDQMLCGMCVFHLDQCWVSPLSDYPEYSTSFWPPPEWI 398


>ref|XP_003599239.1| F-box protein [Medicago truncatula] gi|355488287|gb|AES69490.1|
           F-box protein [Medicago truncatula]
          Length = 800

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/105 (62%), Positives = 83/105 (79%), Gaps = 7/105 (6%)
 Frame = +3

Query: 66  VRFDVFRLEEKEKRWVELTSLGDRVLFLGDDCAFSASASDLCVAKGNCVIF-RDDSFGGV 242
           V  DVFRL+EKEK+WV+LT+LGDRVLFLG+DC+FSASAS+LCVA GNCVI+ RD +  G+
Sbjct: 328 VSIDVFRLDEKEKKWVKLTNLGDRVLFLGEDCSFSASASELCVANGNCVIYSRDYASHGL 387

Query: 243 NG------NAIECGMRVFHLDQGRISPLSDYPGYSELFWPIPDWV 359
                   +++E GMR+FHLDQGR+SPLS YP Y +LFW   DW+
Sbjct: 388 YSMESGMLDSMESGMRIFHLDQGRVSPLSGYPDYFKLFWSPSDWI 432


>ref|XP_003591727.1| F-box protein [Medicago truncatula]
           gi|358344561|ref|XP_003636357.1| F-box protein [Medicago
           truncatula] gi|355480775|gb|AES61978.1| F-box protein
           [Medicago truncatula] gi|355502292|gb|AES83495.1| F-box
           protein [Medicago truncatula]
          Length = 404

 Score =  135 bits (341), Expect = 3e-30
 Identities = 67/101 (66%), Positives = 77/101 (76%)
 Frame = +3

Query: 57  ERAVRFDVFRLEEKEKRWVELTSLGDRVLFLGDDCAFSASASDLCVAKGNCVIFRDDSFG 236
           E A+R  VFRL+EKEK+WV LTSLGDRVLFLG+ C+FSASASDLCVAKGNCVIF D    
Sbjct: 274 EDALRIYVFRLDEKEKKWVSLTSLGDRVLFLGNGCSFSASASDLCVAKGNCVIFID---- 329

Query: 237 GVNGNAIECGMRVFHLDQGRISPLSDYPGYSELFWPIPDWV 359
                 ++ G  VFHLDQ R+SPLSDYP Y  LFWP P+W+
Sbjct: 330 -----YMKSGNCVFHLDQDRLSPLSDYPEYFNLFWPPPEWI 365


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