BLASTX nr result

ID: Glycyrrhiza24_contig00026921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026921
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630982.1| NBS-LRR resistance-like protein [Medicago tr...   159   2e-37
ref|XP_003630832.1| Tir-nbs-lrr resistance protein [Medicago tru...    65   5e-09
ref|XP_002509636.1| leucine-rich repeat-containing protein, puta...    56   4e-06

>ref|XP_003630982.1| NBS-LRR resistance-like protein [Medicago truncatula]
            gi|355525004|gb|AET05458.1| NBS-LRR resistance-like
            protein [Medicago truncatula]
          Length = 1177

 Score =  159 bits (403), Expect = 2e-37
 Identities = 91/170 (53%), Positives = 110/170 (64%), Gaps = 4/170 (2%)
 Frame = +3

Query: 30   FKFHFTNGQELDASAQSNLAADARMRILQDAYRSVFFCFPGSAVPHWFPYHCQGHSVTAK 209
            F FHFTN QELD +  SN+ A+A +RI + AYRS+FFCFPGSAVP  FPY C G  VT +
Sbjct: 941  FIFHFTNSQELDETVCSNIGAEAFLRITRGAYRSLFFCFPGSAVPGRFPYRCTGSLVTME 1000

Query: 210  VDSLDSFNDNRLIGFAMCVVLGHVD--VDDTEAARGEGSFRFRLTFESDGCTHVLPNHDE 383
             DS+D  N+ RL GFA+CVVLG VD  +D+            +LTFESDG TH LP    
Sbjct: 1001 KDSVDCPNNYRLFGFALCVVLGRVDMVIDNIIC---------KLTFESDGHTHSLP-ISN 1050

Query: 384  LRNNF--YWKGQDRLAVQDHTFIWKYHLDFASIDHRRLSRAHNLTFEISK 527
              NN+  Y KG+D L +QDHTFIW Y L F SID+ R+  A   TFE S+
Sbjct: 1051 FGNNYYCYGKGRDMLFIQDHTFIWTYPLHFRSIDN-RVFDAQKFTFEFSE 1099


>ref|XP_003630832.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
           gi|355524854|gb|AET05308.1| Tir-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 148

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 38/71 (53%), Positives = 38/71 (53%)
 Frame = +3

Query: 6   DSKEGTFNFKFHFTNGQELDASAQSNLAADARMRILQDAYRSVFFCFPGSAVPHWFPYHC 185
           DS E T  FKFHFTN QE D    S                  FFC PGSAVP WFPY C
Sbjct: 92  DSNE-TGAFKFHFTNSQEPDVLIVS-----------------AFFCLPGSAVPTWFPYRC 133

Query: 186 QGHSVTAKVDS 218
           QG SVTAK DS
Sbjct: 134 QGLSVTAKKDS 144


>ref|XP_002509636.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223549535|gb|EEF51023.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1137

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
 Frame = +3

Query: 24   FNFKFHFTNGQELDASAQSNLAADARMRILQDAYR-----SVFFCFPGSAVPHWFPYHCQ 188
            ++ K  FT+  ++D SA S+  ADA+  I + A R     S    +PGS +P WF Y  +
Sbjct: 890  YDKKIIFTSCFKMDESAWSDFLADAQFWIQKVAMRAKDEESFSIWYPGSKIPKWFGYQSE 949

Query: 189  GHSVTAKVDSLDSFNDNRLIGFAMCVVLGHVDVDDTEAARGEGSFRFRLTFESDGCTHVL 368
            G S+  ++      + + L+GF +CVVL             E  F +  +F    C + L
Sbjct: 950  GSSIVIQLHPRS--HKHNLLGFTLCVVLAF-----------EDEFEYHNSFFDVLCVYQL 996

Query: 369  PNH--------DELRNNFYWKGQDRLAVQDHTFIWKYHLDFASIDHRRLS 494
             N+        +   +  +  G+++    DH  ++ Y  +F+S +   LS
Sbjct: 997  KNYRGEYTDCKEVYSSRTHVSGKNKYVGSDHVILF-YDPNFSSTEANELS 1045


Top