BLASTX nr result

ID: Glycyrrhiza24_contig00026872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026872
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533230.1| PREDICTED: multidrug and toxin extrusion pro...    65   9e-09
ref|XP_003549122.1| PREDICTED: multidrug and toxin extrusion pro...    64   2e-08
ref|XP_002322435.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003555370.1| PREDICTED: multidrug and toxin extrusion pro...    56   4e-06

>ref|XP_003533230.1| PREDICTED: multidrug and toxin extrusion protein 2-like [Glycine
           max]
          Length = 739

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = +1

Query: 1   QGSCAVTMLVVLSRTDWEFEAQRAKKLT-TGIDDGGCVDDEEKMPHKGESK 150
           QGSCAVTMLVVL RTDWEFEAQRAKKLT  G+D      D+ + P K ESK
Sbjct: 675 QGSCAVTMLVVLCRTDWEFEAQRAKKLTGMGVDHNHHEVDDPEKPLKHESK 725


>ref|XP_003549122.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine
           max]
          Length = 531

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/52 (63%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
 Frame = +1

Query: 1   QGSCAVTMLVVLSRTDWEFEAQRAKKLT------TGIDDGGCVDDEEKMPHK 138
           QGSCAVTMLVVL RTDWEFEAQRAKKLT      +G+D    VD E+ + H+
Sbjct: 464 QGSCAVTMLVVLCRTDWEFEAQRAKKLTGMGGAASGVDQSREVDPEKPLKHE 515


>ref|XP_002322435.1| predicted protein [Populus trichocarpa] gi|222869431|gb|EEF06562.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/54 (62%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
 Frame = +1

Query: 1   QGSCAVTMLVVLSRTDWEFEAQRAKKLTTGIDDGGCVDD----EEKMPHKGESK 150
           QGSCAVTML VL RTDWE EAQRAK+LT  +     VDD    EEK P K E K
Sbjct: 451 QGSCAVTMLFVLGRTDWEHEAQRAKELTNALVLVANVDDSLEVEEKKPPKAEIK 504


>ref|XP_003555370.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine
           max]
          Length = 550

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/50 (64%), Positives = 35/50 (70%)
 Frame = +1

Query: 1   QGSCAVTMLVVLSRTDWEFEAQRAKKLTTGIDDGGCVDDEEKMPHKGESK 150
           QGSCAVTMLVVLSRTDW+ EA RAKKLT+ + D       EK P K E K
Sbjct: 480 QGSCAVTMLVVLSRTDWDAEALRAKKLTSVVVDDSKEVGAEK-PPKAEIK 528


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