BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026832
         (864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553441.1| PREDICTED: pentatricopeptide repeat-containi...   247   2e-63
ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containi...   213   5e-53
gb|ABD33237.1| Pentatricopeptide repeat [Medicago truncatula]         187   3e-45
ref|XP_003595573.1| Pentatricopeptide repeat-containing protein ...   187   3e-45
ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containi...   184   3e-44

>ref|XP_003553441.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g30780-like [Glycine max]
          Length = 504

 Score =  247 bits (631), Expect = 2e-63
 Identities = 144/245 (58%), Positives = 175/245 (71%), Gaps = 9/245 (3%)
 Frame = +3

Query: 156 MKRVWRLSSDAESLFSQILLSSS-------NPKS--STAAAISNGFTRRHLNTLQQQHHQ 308
           M+RVWR SSDA      +LL  S       NPK+  S A A+S+    R+LN++      
Sbjct: 1   MRRVWRFSSDATRRAQLLLLLQSHYFHGFSNPKTTPSLATALSH---HRNLNSVPNA--- 54

Query: 309 SPDTSFLVSLFTVKHSPAPSSKEELVVKATVLKNKLVREASDSVRFLHILDENSDSLIRP 488
               S L+ LFT K     S+KE+L+ KA++LKN+L+RE+SDS R L ILD+NSD+LI+ 
Sbjct: 55  ---CSDLIPLFTAKS--CSSAKEDLINKASILKNELIRESSDSARVLSILDDNSDTLIQR 109

Query: 489 FPGGSVLLELLNQLDYWPSLALKVFDWRRKRNGFDAGNPMIVYEYSKSIKAAGRSRNVEL 668
            P GSVLL L+NQL+  PSLAL+VF WRRKR+  +  NPM  YEYSK IKAAGRS NV+L
Sbjct: 110 HPDGSVLLRLMNQLNSNPSLALQVFSWRRKRSNVE--NPMDAYEYSKGIKAAGRSGNVDL 167

Query: 669 AVELFKEAASKGVKTTSTYNALMGAFMYNGLADRCHSLFLDLKKDATCRPCIATYNILIS 848
           AV+LFKEAA KG+KTTSTYNALMGA M NGLAD C SLF DLK+D TC P IATYNIL+S
Sbjct: 168 AVKLFKEAAVKGIKTTSTYNALMGACMSNGLADNCQSLFCDLKRDPTCDPSIATYNILLS 227

Query: 849 VYGRL 863
           V+GRL
Sbjct: 228 VFGRL 232


>ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g30780-like [Glycine max]
          Length = 442

 Score =  213 bits (542), Expect = 5e-53
 Identities = 108/162 (66%), Positives = 130/162 (80%)
 Frame = +3

Query: 378 ELVVKATVLKNKLVREASDSVRFLHILDENSDSLIRPFPGGSVLLELLNQLDYWPSLALK 557
           +L+ K T+LKN+L+R++ DS R   ILD++ D+L R  P GS LL+L+NQL+  PSLAL+
Sbjct: 10  DLINKVTILKNELIRDSCDSARVQTILDDSFDTLFRRHPNGSALLKLMNQLNSNPSLALQ 69

Query: 558 VFDWRRKRNGFDAGNPMIVYEYSKSIKAAGRSRNVELAVELFKEAASKGVKTTSTYNALM 737
           VF WRRKR+  +A NPM  YEYSK IKAAGRS NV+LAV+LFKEAA KG+KTT TYNALM
Sbjct: 70  VFSWRRKRS--NAENPMDAYEYSKGIKAAGRSGNVDLAVKLFKEAAVKGIKTTGTYNALM 127

Query: 738 GAFMYNGLADRCHSLFLDLKKDATCRPCIATYNILISVYGRL 863
           GAFM+NGL D C SLF DLK+D TC P IATYNIL+SVYGRL
Sbjct: 128 GAFMFNGLPDNCQSLFCDLKRDLTCDPSIATYNILLSVYGRL 169


>gb|ABD33237.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 514

 Score =  187 bits (474), Expect = 3e-45
 Identities = 126/257 (49%), Positives = 154/257 (59%), Gaps = 21/257 (8%)
 Frame = +3

Query: 156 MKRVWR--LSSDAESLFSQILLSSSNPKSSTAAAISNGFTRRHLN-TLQQQHHQSPDTSF 326
           MK  WR  L +   S F+Q L + SNP  +     SN  T ++ N  L       P TS 
Sbjct: 1   MKHFWRFTLKASKSSKFNQ-LHTLSNP--TFIKRYSNSNTPQNPNKVLDLVSFLKPSTSI 57

Query: 327 ---------------LVSLFTVKHSPAPSSKEELVVKATVLKNKLVREASDSVRFLHILD 461
                          LVSLF       P ++E+   K  +L   L+  ASDSV    ILD
Sbjct: 58  PNPESTEQIPNQALDLVSLFK------PLNQED---KVAILVKDLICVASDSVSVTSILD 108

Query: 462 ENSDSLIRPFPGGSVLLELLNQLDYWPSLALKVFDWRRKRN---GFDAGNPMIVYEYSKS 632
           ENS+ LI   P   V ++LLNQLD  PSL L+V +WRRKR         N M  +EYSK 
Sbjct: 109 ENSEFLIGSHP---VYIQLLNQLDSKPSLLLEVINWRRKRKVSFSDACRNSMQAHEYSKG 165

Query: 633 IKAAGRSRNVELAVELFKEAASKGVKTTSTYNALMGAFMYNGLADRCHSLFLDLKKDATC 812
           IKAAGRSRN++LAV LFKEA  KGVK TSTYNALMGA+M+NGL+D+C+SLFLD+KKD TC
Sbjct: 166 IKAAGRSRNIDLAVALFKEAEFKGVKITSTYNALMGAYMFNGLSDKCYSLFLDMKKDPTC 225

Query: 813 RPCIATYNILISVYGRL 863
            P +ATYNI+ISV+GRL
Sbjct: 226 FPSVATYNIVISVFGRL 242


>ref|XP_003595573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484621|gb|AES65824.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 621

 Score =  187 bits (474), Expect = 3e-45
 Identities = 126/257 (49%), Positives = 154/257 (59%), Gaps = 21/257 (8%)
 Frame = +3

Query: 156 MKRVWR--LSSDAESLFSQILLSSSNPKSSTAAAISNGFTRRHLN-TLQQQHHQSPDTSF 326
           MK  WR  L +   S F+Q L + SNP  +     SN  T ++ N  L       P TS 
Sbjct: 1   MKHFWRFTLKASKSSKFNQ-LHTLSNP--TFIKRYSNSNTPQNPNKVLDLVSFLKPSTSI 57

Query: 327 ---------------LVSLFTVKHSPAPSSKEELVVKATVLKNKLVREASDSVRFLHILD 461
                          LVSLF       P ++E+   K  +L   L+  ASDSV    ILD
Sbjct: 58  PNPESTEQIPNQALDLVSLFK------PLNQED---KVAILVKDLICVASDSVSVTSILD 108

Query: 462 ENSDSLIRPFPGGSVLLELLNQLDYWPSLALKVFDWRRKRN---GFDAGNPMIVYEYSKS 632
           ENS+ LI   P   V ++LLNQLD  PSL L+V +WRRKR         N M  +EYSK 
Sbjct: 109 ENSEFLIGSHP---VYIQLLNQLDSKPSLLLEVINWRRKRKVSFSDACRNSMQAHEYSKG 165

Query: 633 IKAAGRSRNVELAVELFKEAASKGVKTTSTYNALMGAFMYNGLADRCHSLFLDLKKDATC 812
           IKAAGRSRN++LAV LFKEA  KGVK TSTYNALMGA+M+NGL+D+C+SLFLD+KKD TC
Sbjct: 166 IKAAGRSRNIDLAVALFKEAEFKGVKITSTYNALMGAYMFNGLSDKCYSLFLDMKKDPTC 225

Query: 813 RPCIATYNILISVYGRL 863
            P +ATYNI+ISV+GRL
Sbjct: 226 FPSVATYNIVISVFGRL 242


>ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780
           [Vitis vinifera] gi|296086664|emb|CBI32299.3| unnamed
           protein product [Vitis vinifera]
          Length = 494

 Score =  184 bits (466), Expect = 3e-44
 Identities = 99/188 (52%), Positives = 131/188 (69%), Gaps = 2/188 (1%)
 Frame = +3

Query: 306 QSPDT-SFLVSLFTVKHSPAP-SSKEELVVKATVLKNKLVREASDSVRFLHILDENSDSL 479
           Q P T + ++ LF+ KHS     ++EEL  K + L+++LV    DS   + +L+E  +SL
Sbjct: 35  QGPYTLTSMIGLFSDKHSELDLRAREELRGKVSQLRDELVPSGDDSDMVVRVLEEKGESL 94

Query: 480 IRPFPGGSVLLELLNQLDYWPSLALKVFDWRRKRNGFDAGNPMIVYEYSKSIKAAGRSRN 659
            R +  GS  +ELL QL  WP LAL+VF+WRR  N  D   PM   EY+K I  AGR++N
Sbjct: 95  FRSYSNGSAFVELLKQLSSWPYLALQVFNWRR--NQTDYSIPMTSEEYAKGISVAGRTKN 152

Query: 660 VELAVELFKEAASKGVKTTSTYNALMGAFMYNGLADRCHSLFLDLKKDATCRPCIATYNI 839
           V+LAVELF EAA+K +KTTSTYNALMGA+M NG A++C +LF DLK++A+C P I TYNI
Sbjct: 153 VDLAVELFTEAANKQIKTTSTYNALMGAYMCNGHAEKCQALFRDLKREASCSPTIVTYNI 212

Query: 840 LISVYGRL 863
           LISV+GRL
Sbjct: 213 LISVFGRL 220