BLASTX nr result

ID: Glycyrrhiza24_contig00026803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026803
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helica...   233   2e-59
ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu...   226   2e-57
ref|XP_003638421.1| ATP-dependent RNA helicase DHX29 [Medicago t...   223   1e-56
ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|2...   216   1e-54
emb|CBI26949.3| unnamed protein product [Vitis vinifera]              213   2e-53

>ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1209

 Score =  233 bits (593), Expect = 2e-59
 Identities = 114/120 (95%), Positives = 115/120 (95%)
 Frame = +3

Query: 3   ADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKL 182
           ADFKDYS QTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKL
Sbjct: 554 ADFKDYSLQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKL 613

Query: 183 LTHAVLGDPKRVLLLTCHGSMASSEQKLIFEEPEDGVRKIVLATNIAETSITINDVVFVL 362
           LTH VLGD  RVLLLTCHGSMASSEQ+LIFEEPEDGVRKIVL TNIAETSITINDVVFVL
Sbjct: 614 LTHTVLGDANRVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLTTNIAETSITINDVVFVL 673


>ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1172

 Score =  226 bits (575), Expect = 2e-57
 Identities = 106/120 (88%), Positives = 113/120 (94%)
 Frame = +3

Query: 3   ADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKL 182
           ADFKDYSPQTQESLSCWNPDCIGF+LIEY+LCNICENE PGAVLVFMTGWDDISSLK+KL
Sbjct: 518 ADFKDYSPQTQESLSCWNPDCIGFNLIEYLLCNICENEMPGAVLVFMTGWDDISSLKDKL 577

Query: 183 LTHAVLGDPKRVLLLTCHGSMASSEQKLIFEEPEDGVRKIVLATNIAETSITINDVVFVL 362
             H +LGDP RVLLLTCHGSMASSEQ+LIF+EP DG RKIVLATNIAETSITINDV+FVL
Sbjct: 578 QVHPILGDPSRVLLLTCHGSMASSEQRLIFDEPNDGARKIVLATNIAETSITINDVIFVL 637


>ref|XP_003638421.1| ATP-dependent RNA helicase DHX29 [Medicago truncatula]
           gi|355504356|gb|AES85559.1| ATP-dependent RNA helicase
           DHX29 [Medicago truncatula]
          Length = 337

 Score =  223 bits (569), Expect = 1e-56
 Identities = 110/122 (90%), Positives = 117/122 (95%), Gaps = 2/122 (1%)
 Frame = +3

Query: 3   ADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKL 182
           ADF++YS QTQESLSCWNPDCIGFSLIEYILC+ICEN+RPGAVLVFMTGWDDISSLKEKL
Sbjct: 78  ADFREYSLQTQESLSCWNPDCIGFSLIEYILCDICENKRPGAVLVFMTGWDDISSLKEKL 137

Query: 183 LTHAVLGDPKRVLLLTCHGSMASSEQ--KLIFEEPEDGVRKIVLATNIAETSITINDVVF 356
            TH VLGDPKRVLLLTCHGSMASSEQ  KLIFEEPEDGVRK+VLATNIAETSIT++DVVF
Sbjct: 138 QTHYVLGDPKRVLLLTCHGSMASSEQVIKLIFEEPEDGVRKVVLATNIAETSITVDDVVF 197

Query: 357 VL 362
           VL
Sbjct: 198 VL 199


>ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|222864946|gb|EEF02077.1|
           predicted protein [Populus trichocarpa]
          Length = 1053

 Score =  216 bits (551), Expect = 1e-54
 Identities = 102/120 (85%), Positives = 112/120 (93%)
 Frame = +3

Query: 3   ADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKL 182
           ADFK+YS QT+ESLSCWNPD IGF+L+EY+LCNICENERPGAVLVFMTGWDDISSLK+KL
Sbjct: 399 ADFKEYSSQTRESLSCWNPDSIGFNLVEYLLCNICENERPGAVLVFMTGWDDISSLKDKL 458

Query: 183 LTHAVLGDPKRVLLLTCHGSMASSEQKLIFEEPEDGVRKIVLATNIAETSITINDVVFVL 362
             H  LGDP RVLLLTCHGSMASSEQ+LIF+EPE+GVRKI LATNIAETSITIND+VFVL
Sbjct: 459 QAHPFLGDPSRVLLLTCHGSMASSEQRLIFDEPEEGVRKIALATNIAETSITINDIVFVL 518


>emb|CBI26949.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  213 bits (541), Expect = 2e-53
 Identities = 101/119 (84%), Positives = 111/119 (93%)
 Frame = +3

Query: 6   DFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLL 185
           DFKDYSPQTQESLSCWNPDCIGF+LIE +LC+ICENE PGAVLVFMTGWDDISSLK+KL 
Sbjct: 524 DFKDYSPQTQESLSCWNPDCIGFNLIENLLCHICENECPGAVLVFMTGWDDISSLKDKLQ 583

Query: 186 THAVLGDPKRVLLLTCHGSMASSEQKLIFEEPEDGVRKIVLATNIAETSITINDVVFVL 362
            H +LGD  +VLLLTCHGSMAS+EQ+LIF+EP DGVRKIVLATNIAETSITINDVVFV+
Sbjct: 584 AHPILGDSDQVLLLTCHGSMASAEQRLIFDEPRDGVRKIVLATNIAETSITINDVVFVV 642


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