BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026794
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ...   259   2e-67
ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containi...   253   1e-65
ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|2...   231   6e-59
emb|CBI17752.3| unnamed protein product [Vitis vinifera]              228   5e-58
ref|XP_002869928.1| pentatricopeptide repeat-containing protein ...   215   3e-54

>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487951|gb|AES69154.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 767

 Score =  259 bits (662), Expect = 2e-67
 Identities = 124/135 (91%), Positives = 131/135 (97%)
 Frame = -2

Query: 406 KQFEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYG 227
           KQFEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALV+TGHLDLALSVY 
Sbjct: 190 KQFEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVKTGHLDLALSVYN 249

Query: 226 DFREDGLVEERVTFMVLVKGLCKAGRIDEMLEVLGKMREKLCKPDVFAYTALVRILVPEG 47
           DFREDGLVEE VTFM+L+KGLCK G+IDEMLEVLG+MREKLCKPDVFAYTALVRI+V EG
Sbjct: 250 DFREDGLVEESVTFMILIKGLCKGGKIDEMLEVLGRMREKLCKPDVFAYTALVRIMVKEG 309

Query: 46  NLDGCLRVWEEMKRD 2
           NLDGCLRVW+EMKRD
Sbjct: 310 NLDGCLRVWKEMKRD 324


>ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Glycine max]
          Length = 733

 Score =  253 bits (645), Expect = 1e-65
 Identities = 122/135 (90%), Positives = 128/135 (94%)
 Frame = -2

Query: 406 KQFEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYG 227
           KQFEILIRMHSDA RGLRVYHVY+KMRNKFGVKPRVFLYNR+MDALVRTGHLDLALSVY 
Sbjct: 200 KQFEILIRMHSDANRGLRVYHVYEKMRNKFGVKPRVFLYNRVMDALVRTGHLDLALSVYD 259

Query: 226 DFREDGLVEERVTFMVLVKGLCKAGRIDEMLEVLGKMREKLCKPDVFAYTALVRILVPEG 47
           D +EDGLVEE VTFMVLVKGLCK GRIDEMLEVLG+MRE+LCKPDVFAYTALV+ILVP G
Sbjct: 260 DLKEDGLVEESVTFMVLVKGLCKCGRIDEMLEVLGRMRERLCKPDVFAYTALVKILVPAG 319

Query: 46  NLDGCLRVWEEMKRD 2
           NLD CLRVWEEMKRD
Sbjct: 320 NLDACLRVWEEMKRD 334



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/121 (31%), Positives = 61/121 (50%)
 Frame = -2

Query: 400 FEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYGDF 221
           F +L++     GR   +  V  +MR +   KP VF Y  ++  LV  G+LD  L V+ + 
Sbjct: 273 FMVLVKGLCKCGRIDEMLEVLGRMRERL-CKPDVFAYTALVKILVPAGNLDACLRVWEEM 331

Query: 220 REDGLVEERVTFMVLVKGLCKAGRIDEMLEVLGKMREKLCKPDVFAYTALVRILVPEGNL 41
           + D +  +   +  ++ GL K GR+ E  E+  +M+ K C  D   Y ALV   V EG +
Sbjct: 332 KRDRVEPDVKAYATMIVGLAKGGRVQEGYELFREMKGKGCLVDRVIYGALVEAFVAEGKV 391

Query: 40  D 38
           +
Sbjct: 392 E 392


>ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|222842206|gb|EEE79753.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score =  231 bits (588), Expect = 6e-59
 Identities = 112/135 (82%), Positives = 123/135 (91%)
 Frame = -2

Query: 406 KQFEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYG 227
           KQFEILIRMHSDA RGLRVY+VY KM  KFGVKPRVFLYNRIMD+L++TGHLDLALSVY 
Sbjct: 196 KQFEILIRMHSDANRGLRVYYVYQKMV-KFGVKPRVFLYNRIMDSLIKTGHLDLALSVYE 254

Query: 226 DFREDGLVEERVTFMVLVKGLCKAGRIDEMLEVLGKMREKLCKPDVFAYTALVRILVPEG 47
           DFR DGLVEE VT+M+L+KGLCKAGRI+EM+EVLG+MRE LCKPDVFAYTA+VR L  EG
Sbjct: 255 DFRRDGLVEESVTYMILIKGLCKAGRIEEMMEVLGRMRENLCKPDVFAYTAMVRALAGEG 314

Query: 46  NLDGCLRVWEEMKRD 2
           NLD CLRVWEEMKRD
Sbjct: 315 NLDACLRVWEEMKRD 329



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/120 (33%), Positives = 62/120 (51%)
 Frame = -2

Query: 400 FEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYGDF 221
           + ILI+    AGR   +  V  +MR     KP VF Y  ++ AL   G+LD  L V+ + 
Sbjct: 268 YMILIKGLCKAGRIEEMMEVLGRMRENL-CKPDVFAYTAMVRALAGEGNLDACLRVWEEM 326

Query: 220 REDGLVEERVTFMVLVKGLCKAGRIDEMLEVLGKMREKLCKPDVFAYTALVRILVPEGNL 41
           + DG+  + + ++ LV  LCK GR+D+  EV  +M+ +    D   Y  LV   V +G +
Sbjct: 327 KRDGVEPDVMAYVTLVTALCKGGRVDKGYEVFKEMKGRRILIDRGIYGILVEAFVADGKI 386


>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  228 bits (580), Expect = 5e-58
 Identities = 108/135 (80%), Positives = 125/135 (92%)
 Frame = -2

Query: 406 KQFEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYG 227
           KQFEILIRMH DA RGLRVY+VY+KM+ KFG+KPRVFLYNRIMD LV+TGHLDLA+SVY 
Sbjct: 188 KQFEILIRMHIDANRGLRVYYVYEKMK-KFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYE 246

Query: 226 DFREDGLVEERVTFMVLVKGLCKAGRIDEMLEVLGKMREKLCKPDVFAYTALVRILVPEG 47
           DF+EDGLVEE VT+M+LVKGLCKAGRIDE+LE+L +MR  LCKPDVFAYTA+V++LV EG
Sbjct: 247 DFKEDGLVEESVTYMILVKGLCKAGRIDEVLELLDRMRGNLCKPDVFAYTAMVKVLVAEG 306

Query: 46  NLDGCLRVWEEMKRD 2
           NLDGCLRVWEEM++D
Sbjct: 307 NLDGCLRVWEEMRKD 321



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/111 (31%), Positives = 57/111 (51%)
 Frame = -2

Query: 400 FEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYGDF 221
           + IL++    AGR   V  + D+MR     KP VF Y  ++  LV  G+LD  L V+ + 
Sbjct: 260 YMILVKGLCKAGRIDEVLELLDRMRGNL-CKPDVFAYTAMVKVLVAEGNLDGCLRVWEEM 318

Query: 220 REDGLVEERVTFMVLVKGLCKAGRIDEMLEVLGKMREKLCKPDVFAYTALV 68
           R+D +  + + +  LV  LC   R+ E  E+  +M++K    D   Y +L+
Sbjct: 319 RKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKYLIDRAIYGSLI 369


>ref|XP_002869928.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315764|gb|EFH46187.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 731

 Score =  215 bits (548), Expect = 3e-54
 Identities = 104/135 (77%), Positives = 120/135 (88%)
 Frame = -2

Query: 406 KQFEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYG 227
           KQFEILIRMH+D  RGLRVY+VY+KM+ KFG KPRVFLYNRIMDALV+ G+ DLAL+VY 
Sbjct: 198 KQFEILIRMHADNRRGLRVYYVYEKMK-KFGFKPRVFLYNRIMDALVKNGYFDLALAVYE 256

Query: 226 DFREDGLVEERVTFMVLVKGLCKAGRIDEMLEVLGKMREKLCKPDVFAYTALVRILVPEG 47
           DF+EDGLVEE  TFM+LVKGLCKAGRI+EMLE+L +MRE LCKPDVFAYTA+++ LV EG
Sbjct: 257 DFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEG 316

Query: 46  NLDGCLRVWEEMKRD 2
           NLD  LRVW+EMKRD
Sbjct: 317 NLDASLRVWDEMKRD 331



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/130 (30%), Positives = 66/130 (50%)
 Frame = -2

Query: 400 FEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYGDF 221
           F IL++    AGR   +  +  +MR     KP VF Y  ++  LV  G+LD +L V+ + 
Sbjct: 270 FMILVKGLCKAGRIEEMLEILQRMRENL-CKPDVFAYTAMIKTLVSEGNLDASLRVWDEM 328

Query: 220 REDGLVEERVTFMVLVKGLCKAGRIDEMLEVLGKMREKLCKPDVFAYTALVRILVPEGNL 41
           + D +  + + +  LV GLCK GRI+   E+  +M+ K    D   Y  L+   V +G +
Sbjct: 329 KRDEIKPDVMAYGTLVVGLCKDGRIERGYELFMEMKGKQILIDREIYRVLIEGFVADGKV 388

Query: 40  DGCLRVWEEM 11
                +W+++
Sbjct: 389 RSACDLWKDL 398