BLASTX nr result

ID: Glycyrrhiza24_contig00026787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026787
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containi...   165   4e-39
emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]   154   6e-36
emb|CBI15196.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-35
ref|XP_002337067.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21

>ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 478

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/95 (82%), Positives = 85/95 (89%)
 Frame = +3

Query: 3   SRVANDLVAELNNDQAAGYLVLLSNIYAFAKRWQDVIAVRQMMIEMGVKKPPGRSWIQVN 182
           S+V N LV ELN DQAAGYLVLLSNIYAF +RWQDVI VRQ MIEMGVKKPPGRSWIQ+N
Sbjct: 372 SQVENKLVPELNGDQAAGYLVLLSNIYAFGQRWQDVITVRQKMIEMGVKKPPGRSWIQIN 431

Query: 183 GVVHNFVAGDMTHKHSSLIYETLCEITKQAQVEGY 287
           GVVHNF+AGDMTHKHSS IYETL ++TKQA +EGY
Sbjct: 432 GVVHNFIAGDMTHKHSSFIYETLRDVTKQANLEGY 466


>emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
          Length = 569

 Score =  154 bits (390), Expect = 6e-36
 Identities = 74/107 (69%), Positives = 88/107 (82%)
 Frame = +3

Query: 3   SRVANDLVAELNNDQAAGYLVLLSNIYAFAKRWQDVIAVRQMMIEMGVKKPPGRSWIQVN 182
           S VA  LV EL  DQAAGYLVLLSN+YA AKRWQDV  VRQ M+E+GV+KP GRSW+Q+N
Sbjct: 463 SHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQIN 522

Query: 183 GVVHNFVAGDMTHKHSSLIYETLCEITKQAQVEGYKPDTTEVLLHAE 323
           GVVH+FVAGD THKH+S +YE L +IT+QA++EGYK D +EVLL  E
Sbjct: 523 GVVHDFVAGDWTHKHASSVYEMLSKITRQAKLEGYKLDISEVLLDVE 569


>emb|CBI15196.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/107 (68%), Positives = 87/107 (81%)
 Frame = +3

Query: 3   SRVANDLVAELNNDQAAGYLVLLSNIYAFAKRWQDVIAVRQMMIEMGVKKPPGRSWIQVN 182
           S VA  L  EL  DQAAGYLVLLSN+YA AKRWQDV  VRQ M+E+GV+KP GRSW+Q+N
Sbjct: 361 SHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQIN 420

Query: 183 GVVHNFVAGDMTHKHSSLIYETLCEITKQAQVEGYKPDTTEVLLHAE 323
           GVVH+FVAGD THKH+S +YE L +IT+QA++EGYK D +EVLL  E
Sbjct: 421 GVVHDFVAGDWTHKHASSVYEMLSKITRQAKLEGYKLDISEVLLDVE 467


>ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 553

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/107 (68%), Positives = 87/107 (81%)
 Frame = +3

Query: 3   SRVANDLVAELNNDQAAGYLVLLSNIYAFAKRWQDVIAVRQMMIEMGVKKPPGRSWIQVN 182
           S VA  L  EL  DQAAGYLVLLSN+YA AKRWQDV  VRQ M+E+GV+KP GRSW+Q+N
Sbjct: 447 SHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQIN 506

Query: 183 GVVHNFVAGDMTHKHSSLIYETLCEITKQAQVEGYKPDTTEVLLHAE 323
           GVVH+FVAGD THKH+S +YE L +IT+QA++EGYK D +EVLL  E
Sbjct: 507 GVVHDFVAGDWTHKHASSVYEMLSKITRQAKLEGYKLDISEVLLDVE 553


>ref|XP_002337067.1| predicted protein [Populus trichocarpa] gi|222837944|gb|EEE76309.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/93 (55%), Positives = 71/93 (76%)
 Frame = +3

Query: 3   SRVANDLVAELNNDQAAGYLVLLSNIYAFAKRWQDVIAVRQMMIEMGVKKPPGRSWIQVN 182
           S V+  LVAE + D+AAGYL LL+ +YA A++WQDV  VRQ M+ MGVKKP G+SW+Q+N
Sbjct: 63  SLVSQKLVAEPDPDKAAGYLSLLAQVYASAEKWQDVATVRQKMVAMGVKKPAGQSWVQIN 122

Query: 183 GVVHNFVAGDMTHKHSSLIYETLCEITKQAQVE 281
            VVH+ V+ D THK++S IYE L +I + ++VE
Sbjct: 123 EVVHDSVSVDKTHKNTSSIYEMLGKIHQASKVE 155


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