BLASTX nr result
ID: Glycyrrhiza24_contig00026778
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00026778 (263 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779... 47 3e-07 ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat... 47 4e-07 ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat... 47 4e-07 ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat... 47 4e-07 ref|XP_003548969.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 40 5e-07 >ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max] Length = 1205 Score = 46.6 bits (109), Expect(2) = 3e-07 Identities = 23/39 (58%), Positives = 27/39 (69%) Frame = -3 Query: 120 QFNKILGSLAKTKKHYRTAISLYQQMEFTGIMPDIFTFN 4 QFNKIL S AK K HY TA+SL ++E GI PD+ T N Sbjct: 61 QFNKILDSFAKMK-HYSTAVSLSHRLELKGIQPDLITLN 98 Score = 32.3 bits (72), Expect(2) = 3e-07 Identities = 14/17 (82%), Positives = 14/17 (82%) Frame = -2 Query: 214 HSQPPSTLNVDDAVSSF 164 HSQPPS NVDDAVS F Sbjct: 31 HSQPPSIQNVDDAVSQF 47 >ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Glycine max] Length = 546 Score = 46.6 bits (109), Expect(2) = 4e-07 Identities = 23/39 (58%), Positives = 27/39 (69%) Frame = -3 Query: 120 QFNKILGSLAKTKKHYRTAISLYQQMEFTGIMPDIFTFN 4 QFNKIL S AK K HY TA+SL ++E GI PD+ T N Sbjct: 61 QFNKILDSFAKIK-HYSTAVSLSHRLELKGIQPDLITLN 98 Score = 32.3 bits (72), Expect(2) = 4e-07 Identities = 14/17 (82%), Positives = 14/17 (82%) Frame = -2 Query: 214 HSQPPSTLNVDDAVSSF 164 HSQPPS NVDDAVS F Sbjct: 31 HSQPPSIQNVDDAVSQF 47 >ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Glycine max] Length = 546 Score = 46.6 bits (109), Expect(2) = 4e-07 Identities = 23/39 (58%), Positives = 27/39 (69%) Frame = -3 Query: 120 QFNKILGSLAKTKKHYRTAISLYQQMEFTGIMPDIFTFN 4 QFNKIL S AK K HY TA+SL ++E GI PD+ T N Sbjct: 61 QFNKILDSFAKMK-HYSTAVSLSHRLELKGIQPDLITLN 98 Score = 32.3 bits (72), Expect(2) = 4e-07 Identities = 14/17 (82%), Positives = 14/17 (82%) Frame = -2 Query: 214 HSQPPSTLNVDDAVSSF 164 HSQPPS NVDDAVS F Sbjct: 31 HSQPPSIQNVDDAVSQF 47 >ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Glycine max] Length = 546 Score = 46.6 bits (109), Expect(2) = 4e-07 Identities = 23/39 (58%), Positives = 27/39 (69%) Frame = -3 Query: 120 QFNKILGSLAKTKKHYRTAISLYQQMEFTGIMPDIFTFN 4 QFNKIL S AK K HY TA+SL ++E GI PD+ T N Sbjct: 61 QFNKILDSFAKMK-HYSTAVSLSHRLELKGIQPDLITLN 98 Score = 32.3 bits (72), Expect(2) = 4e-07 Identities = 14/17 (82%), Positives = 14/17 (82%) Frame = -2 Query: 214 HSQPPSTLNVDDAVSSF 164 HSQPPS NVDDAVS F Sbjct: 31 HSQPPSIQNVDDAVSQF 47 >ref|XP_003548969.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like [Glycine max] Length = 422 Score = 40.4 bits (93), Expect(2) = 5e-07 Identities = 22/39 (56%), Positives = 27/39 (69%) Frame = -3 Query: 120 QFNKILGSLAKTKKHYRTAISLYQQMEFTGIMPDIFTFN 4 +FNKILGS K K +Y AISL +QME GI P++ T N Sbjct: 56 KFNKILGSPVKMK-YYPAAISLSKQMEVKGIEPNLVTLN 93 Score = 38.1 bits (87), Expect(2) = 5e-07 Identities = 23/32 (71%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = -2 Query: 256 PNPIFPLLCFSSLSHSQPPSTLN-VDDAVSSF 164 PNPIFPL CF HSQPPS N VDDAVS F Sbjct: 16 PNPIFPL-CF----HSQPPSIDNVVDDAVSQF 42