BLASTX nr result

ID: Glycyrrhiza24_contig00026754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026754
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36200.1| unknown [Medicago truncatula]                          101   6e-20
ref|XP_003593807.1| CTD small phosphatase-like protein [Medicago...   101   6e-20
ref|XP_003546048.1| PREDICTED: uncharacterized protein C2F7.02c-...    74   1e-11
ref|XP_003541686.1| PREDICTED: carboxy-terminal domain RNA polym...    70   2e-10

>gb|AFK36200.1| unknown [Medicago truncatula]
          Length = 259

 Score =  101 bits (252), Expect = 6e-20
 Identities = 57/109 (52%), Positives = 70/109 (64%)
 Frame = +2

Query: 17  RRWRRKTPIKNXXXXXXXXXXXIHRRITKLLSKLGMPHLSSSTRKRNGYKILKKTTTHFD 196
           RRWRRKTPIKN           IHRRI+KLL+KLG+  LSSS RKRN YKILKK + HF+
Sbjct: 20  RRWRRKTPIKNVVAASSAVLSSIHRRISKLLTKLGLTRLSSSNRKRNSYKILKK-SAHFN 78

Query: 197 FEQEKTPLDSVCRTXXXXXXXXXXXXXXXXXXHKRTVFLDLDETLVHSK 343
           F+Q+    D+VC+T                  +++T+FLDLDETLVHSK
Sbjct: 79  FQQQ----DTVCKT-LLFEDSVENSLLPPSISNRKTIFLDLDETLVHSK 122


>ref|XP_003593807.1| CTD small phosphatase-like protein [Medicago truncatula]
           gi|355482855|gb|AES64058.1| CTD small phosphatase-like
           protein [Medicago truncatula]
          Length = 294

 Score =  101 bits (252), Expect = 6e-20
 Identities = 57/109 (52%), Positives = 70/109 (64%)
 Frame = +2

Query: 17  RRWRRKTPIKNXXXXXXXXXXXIHRRITKLLSKLGMPHLSSSTRKRNGYKILKKTTTHFD 196
           RRWRRKTPIKN           IHRRI+KLL+KLG+  LSSS RKRN YKILKK + HF+
Sbjct: 20  RRWRRKTPIKNVVAASSAVLSSIHRRISKLLTKLGLTRLSSSNRKRNSYKILKK-SAHFN 78

Query: 197 FEQEKTPLDSVCRTXXXXXXXXXXXXXXXXXXHKRTVFLDLDETLVHSK 343
           F+Q+    D+VC+T                  +++T+FLDLDETLVHSK
Sbjct: 79  FQQQ----DTVCKT-LLFEDSVENSLLPPSISNRKTIFLDLDETLVHSK 122


>ref|XP_003546048.1| PREDICTED: uncharacterized protein C2F7.02c-like [Glycine max]
          Length = 288

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 48/114 (42%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
 Frame = +2

Query: 5   HRGSRRWRRKTPIKNXXXXXXXXXXXIHRRITKLLSKLGMPHLSSSTRKRNGYKILKKTT 184
           +  +RRWRRKTPIKN           I RRITKL SK+     S+  +K   YKILKKTT
Sbjct: 18  NNNNRRWRRKTPIKNVVAASSAALATIRRRITKLFSKIARLSTSAHKKKATSYKILKKTT 77

Query: 185 THFDFEQEKTPLDSVCRTXXXXXXXXXXXXXXXXXXH--KRTVFLDLDETLVHS 340
           T          LD++ RT                     ++TVFLDLDETLVHS
Sbjct: 78  T------TDGELDNIRRTLVFDDTTATTTTPLLPPLFSVRKTVFLDLDETLVHS 125


>ref|XP_003541686.1| PREDICTED: carboxy-terminal domain RNA polymerase II polypeptide A
           small phosphatase 2-like [Glycine max]
          Length = 344

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 46/113 (40%), Positives = 56/113 (49%)
 Frame = +2

Query: 2   DHRGSRRWRRKTPIKNXXXXXXXXXXXIHRRITKLLSKLGMPHLSSSTRKRNGYKILKKT 181
           ++  +RRWRRKT IKN           I RRITKL  K+     S+  +K   Y ILKKT
Sbjct: 75  NNHSNRRWRRKTSIKNVVAASSAGLATIRRRITKLFFKIAHLSTSAHKKKATSYNILKKT 134

Query: 182 TTHFDFEQEKTPLDSVCRTXXXXXXXXXXXXXXXXXXHKRTVFLDLDETLVHS 340
            T  D   E   LD++ RT                   ++TVFLDLDETLVHS
Sbjct: 135 KTTTD---EHEQLDNIRRTLLFDDTTTLLPPSFSL---RKTVFLDLDETLVHS 181


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