BLASTX nr result
ID: Glycyrrhiza24_contig00026741
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00026741 (262 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containi... 136 2e-30 ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containi... 134 6e-30 ref|XP_003557083.1| PREDICTED: pentatricopeptide repeat-containi... 124 8e-27 ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containi... 123 2e-26 ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containi... 122 2e-26 >ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like [Glycine max] Length = 705 Score = 136 bits (342), Expect = 2e-30 Identities = 64/86 (74%), Positives = 74/86 (86%) Frame = +3 Query: 3 GVSPDFTTYSTLLRVYTRSQYGKDALGIYKEMKENGMDVSIDLYNVLLAMCADVGCADEA 182 GVSPDF TY+TLLR+Y +QY +DAL +YKEMK NGMD+++DLYN LL MCADVGC +EA Sbjct: 334 GVSPDFITYATLLRIYAGAQYREDALSVYKEMKGNGMDMTVDLYNRLLDMCADVGCIEEA 393 Query: 183 VEIFEDMKSSGTCQPDIWTFSALINV 260 VEIFEDMKSSGTCQPD TFS+LI V Sbjct: 394 VEIFEDMKSSGTCQPDSLTFSSLITV 419 >ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like [Glycine max] Length = 692 Score = 134 bits (338), Expect = 6e-30 Identities = 63/86 (73%), Positives = 73/86 (84%) Frame = +3 Query: 3 GVSPDFTTYSTLLRVYTRSQYGKDALGIYKEMKENGMDVSIDLYNVLLAMCADVGCADEA 182 GVSPDF TY++LL VYTR+Q +DALG+YKEMK NGMD++ DLYN LLAMCADVG D A Sbjct: 326 GVSPDFITYASLLEVYTRAQCSEDALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRA 385 Query: 183 VEIFEDMKSSGTCQPDIWTFSALINV 260 VEIF +MKSSGTCQPD WTFS+LI + Sbjct: 386 VEIFYEMKSSGTCQPDSWTFSSLITI 411 >ref|XP_003557083.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like [Glycine max] Length = 700 Score = 124 bits (311), Expect = 8e-27 Identities = 58/86 (67%), Positives = 69/86 (80%) Frame = +3 Query: 3 GVSPDFTTYSTLLRVYTRSQYGKDALGIYKEMKENGMDVSIDLYNVLLAMCADVGCADEA 182 GVSPDF TY+ LL VYT + ++ALG+YKEMK NGMD++ DLYN LLAMCADVG D A Sbjct: 336 GVSPDFITYACLLEVYTIAHCSEEALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRA 395 Query: 183 VEIFEDMKSSGTCQPDIWTFSALINV 260 EIF +MKSSGTCQPD WTFS++I + Sbjct: 396 AEIFYEMKSSGTCQPDSWTFSSMITM 421 >ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like [Cucumis sativus] gi|449492820|ref|XP_004159111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like [Cucumis sativus] Length = 704 Score = 123 bits (308), Expect = 2e-26 Identities = 55/86 (63%), Positives = 71/86 (82%) Frame = +3 Query: 3 GVSPDFTTYSTLLRVYTRSQYGKDALGIYKEMKENGMDVSIDLYNVLLAMCADVGCADEA 182 G SP + TY++LLR Y R++YG+DAL +YKEMKE G+ +++ LYN LLAMCADVG +EA Sbjct: 349 GFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA 408 Query: 183 VEIFEDMKSSGTCQPDIWTFSALINV 260 VEIF+DMKSSGTC PD WTFS++I + Sbjct: 409 VEIFQDMKSSGTCSPDSWTFSSMITI 434 >ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like [Glycine max] Length = 707 Score = 122 bits (307), Expect = 2e-26 Identities = 58/86 (67%), Positives = 69/86 (80%) Frame = +3 Query: 3 GVSPDFTTYSTLLRVYTRSQYGKDALGIYKEMKENGMDVSIDLYNVLLAMCADVGCADEA 182 GVSPDF TY+ LL VYT + Y +DALG+YKEMK NGMD++ DLYN LLAM AD+G D A Sbjct: 340 GVSPDFITYACLLEVYTIAHYSEDALGVYKEMKGNGMDMTADLYNKLLAMYADMGYIDRA 399 Query: 183 VEIFEDMKSSGTCQPDIWTFSALINV 260 VEIF +M SSGTCQPD WTF++LI + Sbjct: 400 VEIFYEMNSSGTCQPDSWTFASLIAI 425