BLASTX nr result

ID: Glycyrrhiza24_contig00026741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026741
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containi...   134   6e-30
ref|XP_003557083.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26

>ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 705

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/86 (74%), Positives = 74/86 (86%)
 Frame = +3

Query: 3   GVSPDFTTYSTLLRVYTRSQYGKDALGIYKEMKENGMDVSIDLYNVLLAMCADVGCADEA 182
           GVSPDF TY+TLLR+Y  +QY +DAL +YKEMK NGMD+++DLYN LL MCADVGC +EA
Sbjct: 334 GVSPDFITYATLLRIYAGAQYREDALSVYKEMKGNGMDMTVDLYNRLLDMCADVGCIEEA 393

Query: 183 VEIFEDMKSSGTCQPDIWTFSALINV 260
           VEIFEDMKSSGTCQPD  TFS+LI V
Sbjct: 394 VEIFEDMKSSGTCQPDSLTFSSLITV 419


>ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 692

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/86 (73%), Positives = 73/86 (84%)
 Frame = +3

Query: 3   GVSPDFTTYSTLLRVYTRSQYGKDALGIYKEMKENGMDVSIDLYNVLLAMCADVGCADEA 182
           GVSPDF TY++LL VYTR+Q  +DALG+YKEMK NGMD++ DLYN LLAMCADVG  D A
Sbjct: 326 GVSPDFITYASLLEVYTRAQCSEDALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRA 385

Query: 183 VEIFEDMKSSGTCQPDIWTFSALINV 260
           VEIF +MKSSGTCQPD WTFS+LI +
Sbjct: 386 VEIFYEMKSSGTCQPDSWTFSSLITI 411


>ref|XP_003557083.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 700

 Score =  124 bits (311), Expect = 8e-27
 Identities = 58/86 (67%), Positives = 69/86 (80%)
 Frame = +3

Query: 3   GVSPDFTTYSTLLRVYTRSQYGKDALGIYKEMKENGMDVSIDLYNVLLAMCADVGCADEA 182
           GVSPDF TY+ LL VYT +   ++ALG+YKEMK NGMD++ DLYN LLAMCADVG  D A
Sbjct: 336 GVSPDFITYACLLEVYTIAHCSEEALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRA 395

Query: 183 VEIFEDMKSSGTCQPDIWTFSALINV 260
            EIF +MKSSGTCQPD WTFS++I +
Sbjct: 396 AEIFYEMKSSGTCQPDSWTFSSMITM 421


>ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Cucumis sativus]
           gi|449492820|ref|XP_004159111.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Cucumis sativus]
          Length = 704

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/86 (63%), Positives = 71/86 (82%)
 Frame = +3

Query: 3   GVSPDFTTYSTLLRVYTRSQYGKDALGIYKEMKENGMDVSIDLYNVLLAMCADVGCADEA 182
           G SP + TY++LLR Y R++YG+DAL +YKEMKE G+ +++ LYN LLAMCADVG  +EA
Sbjct: 349 GFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA 408

Query: 183 VEIFEDMKSSGTCQPDIWTFSALINV 260
           VEIF+DMKSSGTC PD WTFS++I +
Sbjct: 409 VEIFQDMKSSGTCSPDSWTFSSMITI 434


>ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 707

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/86 (67%), Positives = 69/86 (80%)
 Frame = +3

Query: 3   GVSPDFTTYSTLLRVYTRSQYGKDALGIYKEMKENGMDVSIDLYNVLLAMCADVGCADEA 182
           GVSPDF TY+ LL VYT + Y +DALG+YKEMK NGMD++ DLYN LLAM AD+G  D A
Sbjct: 340 GVSPDFITYACLLEVYTIAHYSEDALGVYKEMKGNGMDMTADLYNKLLAMYADMGYIDRA 399

Query: 183 VEIFEDMKSSGTCQPDIWTFSALINV 260
           VEIF +M SSGTCQPD WTF++LI +
Sbjct: 400 VEIFYEMNSSGTCQPDSWTFASLIAI 425


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