BLASTX nr result

ID: Glycyrrhiza24_contig00026740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026740
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595543.1| Pentatricopeptide repeat-containing protein ...   305   4e-81
ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containi...   296   2e-78
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   265   3e-69
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   265   3e-69
ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2...   245   4e-63

>ref|XP_003595543.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355484591|gb|AES65794.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 958

 Score =  305 bits (780), Expect = 4e-81
 Identities = 148/184 (80%), Positives = 166/184 (90%)
 Frame = -1

Query: 554  ITWNTMISGLAQNGRGKEALALFEVMIKDGIKPDYISFVAVLFACSHTGLVDEGRRYFAL 375
            ITWN+M+SG AQNGRG EALALFE MIK+GIKPD I+FVAVLFACSH GLVDEGR+ F L
Sbjct: 755  ITWNSMVSGFAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFACSHAGLVDEGRKVFTL 814

Query: 374  MKGEYGMEPAVEHYNCMVDLLGRAEFIEEAESLLENADCGQDRSSLWAVLLGACTKCSDH 195
            M GEYG++P VEHYNCM+DLLGRA FI+EAE LLENADC  D+S LWA LLGACTKCSD+
Sbjct: 815  M-GEYGIKPVVEHYNCMIDLLGRAGFIDEAECLLENADCRYDKS-LWAALLGACTKCSDY 872

Query: 194  VTAERVAKRMIELDPDFHLSYVLLGNIYREVGRWNDALEIRKLMEDRGVKKLPGKSWVDS 15
             TAERVA++MIEL+PDFHLSYVLL NIYREVGRW+DALEIRKLMEDRGVKK+ GKSW+DS
Sbjct: 873  RTAERVARKMIELEPDFHLSYVLLNNIYREVGRWDDALEIRKLMEDRGVKKMAGKSWIDS 932

Query: 14   ENRK 3
            +NRK
Sbjct: 933  QNRK 936


>ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Glycine max]
          Length = 611

 Score =  296 bits (757), Expect = 2e-78
 Identities = 137/184 (74%), Positives = 162/184 (88%)
 Frame = -1

Query: 554 ITWNTMISGLAQNGRGKEALALFEVMIKDGIKPDYISFVAVLFACSHTGLVDEGRRYFAL 375
           ITWN MI G AQNGRG+E + LFE M+K+G++PD+ISFV VLFACSH GLVD+GRRYF L
Sbjct: 424 ITWNAMIGGFAQNGRGQEGVELFEEMVKEGVRPDWISFVNVLFACSHNGLVDQGRRYFDL 483

Query: 374 MKGEYGMEPAVEHYNCMVDLLGRAEFIEEAESLLENADCGQDRSSLWAVLLGACTKCSDH 195
           M+ EYG+ P V HY CM+D+LGRAE IEEAESLLE+ADC  D S  WAVLLGACTKCSD+
Sbjct: 484 MRREYGIRPGVVHYTCMIDILGRAELIEEAESLLESADCRYDHSR-WAVLLGACTKCSDY 542

Query: 194 VTAERVAKRMIELDPDFHLSYVLLGNIYREVGRWNDALEIRKLMEDRGVKKLPGKSWVDS 15
           VTAER+AK+MI+L+PDFHLSYVLLGNIYR VG+WN+ALEIRKLME+RGVKK+PGKSW++S
Sbjct: 543 VTAERIAKKMIQLEPDFHLSYVLLGNIYRAVGKWNEALEIRKLMEERGVKKVPGKSWIES 602

Query: 14  ENRK 3
           E +K
Sbjct: 603 EKQK 606


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  265 bits (678), Expect = 3e-69
 Identities = 120/182 (65%), Positives = 153/182 (84%)
 Frame = -1

Query: 554 ITWNTMISGLAQNGRGKEALALFEVMIKDGIKPDYISFVAVLFACSHTGLVDEGRRYFAL 375
           ITWN+MI G AQNGRG+EAL +F  M+K+GIKPDYISF+ +LFACSH GLVDEGR YF  
Sbjct: 427 ITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFIS 486

Query: 374 MKGEYGMEPAVEHYNCMVDLLGRAEFIEEAESLLENADCGQDRSSLWAVLLGACTKCSDH 195
           M  +YG++  +EHY+CMVDLLGRA  +EEAE L+E +D  +D SSLWA LLGACT C+++
Sbjct: 487 MTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDF-RDDSSLWAALLGACTTCTNY 545

Query: 194 VTAERVAKRMIELDPDFHLSYVLLGNIYREVGRWNDALEIRKLMEDRGVKKLPGKSWVDS 15
             AER+AKR++EL+PD+HLSYVLL N+Y+ VGRWNDAL IR+LM+DRGV K+PGKSW+++
Sbjct: 546 EIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIET 605

Query: 14  EN 9
           +N
Sbjct: 606 KN 607


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  265 bits (678), Expect = 3e-69
 Identities = 120/182 (65%), Positives = 153/182 (84%)
 Frame = -1

Query: 554  ITWNTMISGLAQNGRGKEALALFEVMIKDGIKPDYISFVAVLFACSHTGLVDEGRRYFAL 375
            ITWN+MI G AQNGRG+EAL +F  M+K+GIKPDYISF+ +LFACSH GLVDEGR YF  
Sbjct: 486  ITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFIS 545

Query: 374  MKGEYGMEPAVEHYNCMVDLLGRAEFIEEAESLLENADCGQDRSSLWAVLLGACTKCSDH 195
            M  +YG++  +EHY+CMVDLLGRA  +EEAE L+E +D  +D SSLWA LLGACT C+++
Sbjct: 546  MTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDF-RDDSSLWAALLGACTTCTNY 604

Query: 194  VTAERVAKRMIELDPDFHLSYVLLGNIYREVGRWNDALEIRKLMEDRGVKKLPGKSWVDS 15
              AER+AKR++EL+PD+HLSYVLL N+Y+ VGRWNDAL IR+LM+DRGV K+PGKSW+++
Sbjct: 605  EIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIET 664

Query: 14   EN 9
            +N
Sbjct: 665  KN 666


>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  245 bits (625), Expect = 4e-63
 Identities = 113/180 (62%), Positives = 141/180 (78%)
 Frame = -1

Query: 554 ITWNTMISGLAQNGRGKEALALFEVMIKDGIKPDYISFVAVLFACSHTGLVDEGRRYFAL 375
           ITWN+MI G AQNGRG E   LF+ MI++GI+PDYISFV VLFACSH GLVD+G++YFA 
Sbjct: 428 ITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAA 487

Query: 374 MKGEYGMEPAVEHYNCMVDLLGRAEFIEEAESLLENADCGQDRSSLWAVLLGACTKCSDH 195
           M   Y ++P +EHYNCM+DLLGRA  +EEAE+L+ENA+C +D  SLW VLLGAC      
Sbjct: 488 MTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANC-RDEPSLWTVLLGACAASPHS 546

Query: 194 VTAERVAKRMIELDPDFHLSYVLLGNIYREVGRWNDALEIRKLMEDRGVKKLPGKSWVDS 15
            TAER+AK+ +EL PD HLSYV L N+YR VGRW+DA++IR LM  RGV K+PG SW+++
Sbjct: 547 ATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRGVGKMPGTSWIET 606


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