BLASTX nr result
ID: Glycyrrhiza24_contig00026714
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00026714
(403 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003615696.1| Pentatricopeptide repeat-containing protein ... 231 6e-59
ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containi... 204 8e-51
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi... 180 9e-44
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi... 180 9e-44
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi... 178 5e-43
>ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517031|gb|AES98654.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 887
Score = 231 bits (588), Expect = 6e-59
Identities = 109/134 (81%), Positives = 120/134 (89%)
Frame = -1
Query: 403 FYGLPWKDVISWNSMLSGYVLHGCSESALDLFYEMRKEGIQPNRGTFASIIFAYSHAGMV 224
F L WKD +SWNSMLS YVLHGCSESALDLFY+MRK+G+QPNRGTFASI+ AY HAGMV
Sbjct: 584 FNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGMV 643
Query: 223 DEGKSVFSSITEEYLIRPGMEHYSAMVYLLGHSGKLAEALEFIQNMPIEPNSSVWDAFLT 44
DEGKSVFS IT++YL+R GMEHYSAMVYLLG SGKLAEAL+FIQ+MPIEPNSSVW A LT
Sbjct: 644 DEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALLT 703
Query: 43 ACRFHRNFRLAVLA 2
ACR HRNF +AVLA
Sbjct: 704 ACRIHRNFGVAVLA 717
Score = 57.0 bits (136), Expect = 2e-06
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Frame = -1
Query: 385 KDVISWNSMLSGYVLHGCSESALDLFYEMRKEGIQPNRGTFASIIFAYSHAGMVDEGKSV 206
+DV SWNS++ GY G A +LF +M++ PN T+ +I Y +G D+ +
Sbjct: 418 RDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDL 477
Query: 205 FSSITEEYLIRPGMEHYSAMVYLLGHSGKLAEALEFIQNMP---IEPNSSVWDAFLTAC 38
F SI ++ + +++++ SG+ +AL+ +NM I PNS + L C
Sbjct: 478 FKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVC 536
>ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Glycine max]
Length = 945
Score = 204 bits (518), Expect = 8e-51
Identities = 99/134 (73%), Positives = 113/134 (84%)
Frame = -1
Query: 403 FYGLPWKDVISWNSMLSGYVLHGCSESALDLFYEMRKEGIQPNRGTFASIIFAYSHAGMV 224
F GL KD+ISWNS+LSGYVLHGCSESALDLF +MRK+G+ P+R T SII AYSHA MV
Sbjct: 585 FDGLSPKDIISWNSLLSGYVLHGCSESALDLFDQMRKDGLHPSRVTLTSIISAYSHAEMV 644
Query: 223 DEGKSVFSSITEEYLIRPGMEHYSAMVYLLGHSGKLAEALEFIQNMPIEPNSSVWDAFLT 44
DEGK FS+I+EEY IR +EHYSAMVYLLG SGKLA+ALEFIQNMP+EPNSSVW A LT
Sbjct: 645 DEGKHAFSNISEEYQIRLDLEHYSAMVYLLGRSGKLAKALEFIQNMPVEPNSSVWAALLT 704
Query: 43 ACRFHRNFRLAVLA 2
ACR H+NF +A+ A
Sbjct: 705 ACRIHKNFGMAIFA 718
Score = 56.6 bits (135), Expect = 2e-06
Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Frame = -1
Query: 385 KDVISWNSMLSGYVLHGCSESALDLFYEMRKEGIQPNRGTFASIIFAYSHAGMVDEGKSV 206
++ +SWN +++GY G E A F M++EG++P T+ +I +YS G D +
Sbjct: 248 RNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGMEPGLVTWNILIASYSQLGHCDIAMDL 307
Query: 205 FSSITEEYLIRPGMEHYSAMVYLLGHSGKLAEALEFIQNM---PIEPNSSVWDAFLTAC 38
+ E + I P + +++M+ G++ EA + +++M +EPNS + +AC
Sbjct: 308 MRKM-ESFGITPDVYTWTSMISGFTQKGRINEAFDLLRDMLIVGVEPNSITIASAASAC 365
>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 180 bits (457), Expect = 9e-44
Identities = 85/134 (63%), Positives = 108/134 (80%)
Frame = -1
Query: 403 FYGLPWKDVISWNSMLSGYVLHGCSESALDLFYEMRKEGIQPNRGTFASIIFAYSHAGMV 224
F G+ KD+I+WNS+++GY+LHGCS+SA LF +MR GI+PNRGT ASII AY AGMV
Sbjct: 581 FNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMV 640
Query: 223 DEGKSVFSSITEEYLIRPGMEHYSAMVYLLGHSGKLAEALEFIQNMPIEPNSSVWDAFLT 44
D+G+ VFSSITEE+ I P ++HY AMV L G SG+LA+A+EFI++MPIEP+ S+W + LT
Sbjct: 641 DKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLT 700
Query: 43 ACRFHRNFRLAVLA 2
ACRFH N LAVLA
Sbjct: 701 ACRFHGNLNLAVLA 714
>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 180 bits (457), Expect = 9e-44
Identities = 85/134 (63%), Positives = 108/134 (80%)
Frame = -1
Query: 403 FYGLPWKDVISWNSMLSGYVLHGCSESALDLFYEMRKEGIQPNRGTFASIIFAYSHAGMV 224
F G+ KD+I+WNS+++GY+LHGCS+SA LF +MR GI+PNRGT ASII AY AGMV
Sbjct: 581 FNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMV 640
Query: 223 DEGKSVFSSITEEYLIRPGMEHYSAMVYLLGHSGKLAEALEFIQNMPIEPNSSVWDAFLT 44
D+G+ VFSSITEE+ I P ++HY AMV L G SG+LA+A+EFI++MPIEP+ S+W + LT
Sbjct: 641 DKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLT 700
Query: 43 ACRFHRNFRLAVLA 2
ACRFH N LAVLA
Sbjct: 701 ACRFHGNLNLAVLA 714
>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 178 bits (451), Expect = 5e-43
Identities = 83/134 (61%), Positives = 109/134 (81%)
Frame = -1
Query: 403 FYGLPWKDVISWNSMLSGYVLHGCSESALDLFYEMRKEGIQPNRGTFASIIFAYSHAGMV 224
F G+ KD+ISWNS+++GYVLHGCS+SALDLF +M K G++P+RGTF SII+A+S +GMV
Sbjct: 586 FQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMV 645
Query: 223 DEGKSVFSSITEEYLIRPGMEHYSAMVYLLGHSGKLAEALEFIQNMPIEPNSSVWDAFLT 44
D+GK VFSS+ E+Y I PG+EH+SAM+ LLG SGKL EA+EFI++M IEP+S +W A LT
Sbjct: 646 DKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLT 705
Query: 43 ACRFHRNFRLAVLA 2
A + H N LA+ A
Sbjct: 706 ASKIHGNIGLAIRA 719
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/125 (29%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Frame = -1
Query: 403 FYGLPWKDVISWNSMLSGYVLHGCSESALDLFYEMRKEGIQPNRGTFASIIFAYSHAGMV 224
F + ++D +SWNS+++GY G E + LF +M++EGI+P T+ +I +YS +G
Sbjct: 243 FENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKC 302
Query: 223 DEGKSVFSSITEEYLIRPGMEHYSAMVYLLGHSGKLAEALEFIQNM---PIEPNSSVWDA 53
D+ + + E + I P + +++M+ + + ++ALE + M IEPN +
Sbjct: 303 DDAMELMKKM-ESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTS 361
Query: 52 FLTAC 38
++AC
Sbjct: 362 GISAC 366
Score = 63.2 bits (152), Expect = 2e-08
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Frame = -1
Query: 385 KDVISWNSMLSGYVLHGCSESALDLFYEMRKEGIQPNRGTFASIIFAYSHAGMVDEGKSV 206
KDV +WNSM+ GY G A DLF +M + + PN T+ ++I Y G D+ +
Sbjct: 420 KDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDL 479
Query: 205 FSSITEEYLIRPGMEHYSAMV--YLL-GHSGKLAEALEFIQNMPIEPNSSVWDAFLTAC 38
F + ++ LI+ +++++ YL GH K +Q+ I PNS + L AC
Sbjct: 480 FHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPAC 538