BLASTX nr result

ID: Glycyrrhiza24_contig00026711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026711
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus c...   289   1e-76
ref|XP_002320371.1| predicted protein [Populus trichocarpa] gi|2...   277   7e-73
ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydr...   275   4e-72
ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate deh...   263   8e-69
emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]   263   8e-69

>ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus communis]
           gi|223540079|gb|EEF41656.1| shikimate dehydrogenase,
           putative [Ricinus communis]
          Length = 515

 Score =  289 bits (740), Expect = 1e-76
 Identities = 134/167 (80%), Positives = 150/167 (89%)
 Frame = -2

Query: 502 GSLEDKPIPGLPTLLSLKHVYKLEHVNADTKVFGLVSNPVGHSKGPILHNPAFRHAGYNG 323
           GSL DK +PG+PTL SL+HVYKLE++N+DTKVFGL+SNPVGHSKGPILHNPAFRH GYNG
Sbjct: 205 GSLRDKAVPGMPTLFSLRHVYKLEYINSDTKVFGLISNPVGHSKGPILHNPAFRHTGYNG 264

Query: 322 IYVPMLVDDVKEFFSTYTSMDFAGFSVGIPYKEAAIGCCDEVHPLAKSIGAVNTIIRRPT 143
           IYVPM VDD+KEFF TYTS DFAGFSVGIP+KEAA+ CCDEVHPLAKSIGAVNTI+RRPT
Sbjct: 265 IYVPMQVDDIKEFFRTYTSTDFAGFSVGIPHKEAAVSCCDEVHPLAKSIGAVNTIVRRPT 324

Query: 142 DGKLIGYNTDCEASITAIEDAMRGRQGVKGEASHTSPIAGKVFVLVG 2
           DGKL+GYNTDCEASITAIEDA+R R+     A  TSP+AGK FVL+G
Sbjct: 325 DGKLVGYNTDCEASITAIEDALRERRPTNRGALDTSPLAGKTFVLIG 371


>ref|XP_002320371.1| predicted protein [Populus trichocarpa] gi|222861144|gb|EEE98686.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  277 bits (708), Expect = 7e-73
 Identities = 129/167 (77%), Positives = 149/167 (89%)
 Frame = -2

Query: 502 GSLEDKPIPGLPTLLSLKHVYKLEHVNADTKVFGLVSNPVGHSKGPILHNPAFRHAGYNG 323
           GSL DK +PG+PTLLSL+ +YKLE++NADTKVFGL+SNPVGHSKGP+LHNPAFRH GYNG
Sbjct: 30  GSLSDKAVPGMPTLLSLRQIYKLEYINADTKVFGLISNPVGHSKGPVLHNPAFRHTGYNG 89

Query: 322 IYVPMLVDDVKEFFSTYTSMDFAGFSVGIPYKEAAIGCCDEVHPLAKSIGAVNTIIRRPT 143
           IYVPM VDDVKEFF TYTS DFAGFSVGIP+KEAA+GCCDEVHPLAKSIGAVNTI+RRPT
Sbjct: 90  IYVPMQVDDVKEFFRTYTSSDFAGFSVGIPHKEAAVGCCDEVHPLAKSIGAVNTIVRRPT 149

Query: 142 DGKLIGYNTDCEASITAIEDAMRGRQGVKGEASHTSPIAGKVFVLVG 2
           DGKL+GYNTDC+ASI+AIEDA+ G + +       SP++GK FVL+G
Sbjct: 150 DGKLVGYNTDCDASISAIEDALTGTKLI---ILVPSPLSGKTFVLIG 193


>ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222861143|gb|EEE98685.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 504

 Score =  275 bits (702), Expect = 4e-72
 Identities = 128/167 (76%), Positives = 146/167 (87%)
 Frame = -2

Query: 502 GSLEDKPIPGLPTLLSLKHVYKLEHVNADTKVFGLVSNPVGHSKGPILHNPAFRHAGYNG 323
           GSL DK +PG+PTLLSL+ +YKLE++NADTKVFGL+SNPVGHSKGP+LHNPAFRH GYNG
Sbjct: 205 GSLSDKAVPGMPTLLSLRQIYKLEYINADTKVFGLISNPVGHSKGPVLHNPAFRHTGYNG 264

Query: 322 IYVPMLVDDVKEFFSTYTSMDFAGFSVGIPYKEAAIGCCDEVHPLAKSIGAVNTIIRRPT 143
           IYVPM VDDVKEFF TYTS DFAGFSVGIP+KEAA+GCCDEVHPLAKSIGAVNTI+RRPT
Sbjct: 265 IYVPMQVDDVKEFFRTYTSSDFAGFSVGIPHKEAAVGCCDEVHPLAKSIGAVNTIVRRPT 324

Query: 142 DGKLIGYNTDCEASITAIEDAMRGRQGVKGEASHTSPIAGKVFVLVG 2
           DGKL+GYNTDC+ASI+AIEDA+             SP++GK FVL+G
Sbjct: 325 DGKLVGYNTDCDASISAIEDALT-----------ASPLSGKTFVLIG 360


>ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
           dehydrogenase, chloroplastic [Vitis vinifera]
           gi|298204989|emb|CBI34296.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  263 bits (673), Expect = 8e-69
 Identities = 126/167 (75%), Positives = 142/167 (85%)
 Frame = -2

Query: 502 GSLEDKPIPGLPTLLSLKHVYKLEHVNADTKVFGLVSNPVGHSKGPILHNPAFRHAGYNG 323
           GS+E  P+ GLPTL SL+  YK++++N DTKVFGL+S PVGHSKGPILHNPAFRH  YNG
Sbjct: 209 GSMEGSPVAGLPTLESLREAYKVQYINKDTKVFGLISKPVGHSKGPILHNPAFRHVNYNG 268

Query: 322 IYVPMLVDDVKEFFSTYTSMDFAGFSVGIPYKEAAIGCCDEVHPLAKSIGAVNTIIRRPT 143
           IYVPMLVDD+KEFFS Y+S DFAGFSVGIPYKEA  G CDE+HPLA+SIGAVNTI+RRP+
Sbjct: 269 IYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYKEAVTGFCDELHPLAQSIGAVNTIMRRPS 328

Query: 142 DGKLIGYNTDCEASITAIEDAMRGRQGVKGEASHTSPIAGKVFVLVG 2
           DGKLIGYNTDCEASITAIEDA+R R    GEA   SP+ GK FVLVG
Sbjct: 329 DGKLIGYNTDCEASITAIEDALRERGLPNGEAPLNSPLTGKQFVLVG 375


>emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]
          Length = 1071

 Score =  263 bits (673), Expect = 8e-69
 Identities = 126/167 (75%), Positives = 142/167 (85%)
 Frame = -2

Query: 502 GSLEDKPIPGLPTLLSLKHVYKLEHVNADTKVFGLVSNPVGHSKGPILHNPAFRHAGYNG 323
           GS+E  P+ GLPTL SL+  YK++++N DTKVFGL+S PVGHSKGPILHNPAFRH  YNG
Sbjct: 209 GSMEGSPVAGLPTLESLREAYKVQYINKDTKVFGLISKPVGHSKGPILHNPAFRHVNYNG 268

Query: 322 IYVPMLVDDVKEFFSTYTSMDFAGFSVGIPYKEAAIGCCDEVHPLAKSIGAVNTIIRRPT 143
           IYVPMLVDD+KEFFS Y+S DFAGFSVGIPYKEA  G CDE+HPLA+SIGAVNTI+RRP+
Sbjct: 269 IYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYKEAVTGFCDELHPLAQSIGAVNTIMRRPS 328

Query: 142 DGKLIGYNTDCEASITAIEDAMRGRQGVKGEASHTSPIAGKVFVLVG 2
           DGKLIGYNTDCEASITAIEDA+R R    GEA   SP+ GK FVLVG
Sbjct: 329 DGKLIGYNTDCEASITAIEDALRERGLPNGEAPLNSPLTGKQFVLVG 375



 Score =  157 bits (396), Expect = 1e-36
 Identities = 82/170 (48%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
 Frame = -2

Query: 502  GSLEDKPI--PGLPTLLSLKHVYKLEHVNADTKVFGLVSNPVGHSKGPILHNPAFRHAGY 329
            G+LE   I  PG PT   L  +Y    +  DTKV+G++  PVGHSK P+L N AF+  G 
Sbjct: 761  GALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKVYGIIGKPVGHSKSPLLFNAAFKKVGL 820

Query: 328  NGIYVPMLVDDVKEFFSTYTSMDF-AGFSVGIPYKEAAIGCCDEVHPLAKSIGAVNTIIR 152
            N +YV +LVDDV++FF+TY++ DF +G S  IP+KE AI C D + P+A+ IGA+N I+R
Sbjct: 821  NAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPHKEVAIKCMDTIDPIARKIGAINNIVR 880

Query: 151  RPTDGKLIGYNTDCEASITAIEDAMRGRQGVKGEASHTSPIAGKVFVLVG 2
            +P DGKL  +NTD   +I AIED +R   G     +  SP+AGK+FV++G
Sbjct: 881  KP-DGKLTAFNTDYIGAIEAIEDGLRESNG--SSPAVGSPLAGKLFVVLG 927


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