BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026681
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
gb|ACU21279.1| unknown [Glycine max]                                  116   2e-24
ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|NP_568460.1| pentatricopeptide repeat-containing protein [Ar...    66   3e-09

>ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Glycine max]
          Length = 577

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/87 (71%), Positives = 68/87 (78%)
 Frame = +3

Query: 6   ALWFLDEMVQRRYRPDLMTYTELLPDLITFTELLRGFCIRGDLKAAEELYAKILKSGLLT 185
           AL   D+MVQR Y PDL+TYTEL+          RGFCIRG +K AEELYAKILKSGLL 
Sbjct: 491 ALLLHDQMVQRGYEPDLITYTELV----------RGFCIRGKMKEAEELYAKILKSGLLN 540

Query: 186 DHVPVQILFNMYCKLEEPVVAFNFYQD 266
           DHVPVQILFN YCKL+EPV+AFNFYQD
Sbjct: 541 DHVPVQILFNKYCKLKEPVIAFNFYQD 567


>gb|ACU21279.1| unknown [Glycine max]
          Length = 112

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/87 (68%), Positives = 65/87 (74%)
 Frame = +3

Query: 6   ALWFLDEMVQRRYRPDLMTYTELLPDLITFTELLRGFCIRGDLKAAEELYAKILKSGLLT 185
           AL   +EMVQR Y PDL+TYTEL+          RGFC RG +K AEELYAKILKSGLL 
Sbjct: 29  ALQLHNEMVQRGYEPDLITYTELV----------RGFCTRGKMKEAEELYAKILKSGLLN 78

Query: 186 DHVPVQILFNMYCKLEEPVVAFNFYQD 266
           DHVPVQI+FN YCKLEEPV AF FYQD
Sbjct: 79  DHVPVQIIFNKYCKLEEPVRAFKFYQD 105


>ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|222874911|gb|EEF12042.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 5/75 (6%)
 Frame = +3

Query: 54  LMTYTELL-----PDLITFTELLRGFCIRGDLKAAEELYAKILKSGLLTDHVPVQILFNM 218
           L  Y E+L     PD+IT+TEL+RG+C++ + K AEEL AK+LKSGLL DHVP QIL   
Sbjct: 423 LQLYDEMLRGGCNPDMITYTELIRGYCVKYNTKEAEELLAKLLKSGLLIDHVPFQILIKQ 482

Query: 219 YCKLEEPVVAFNFYQ 263
           YCK++EP  AF  Y+
Sbjct: 483 YCKMKEPDRAFQLYR 497


>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/83 (48%), Positives = 51/83 (61%)
 Frame = +3

Query: 6   ALWFLDEMVQRRYRPDLMTYTELLPDLITFTELLRGFCIRGDLKAAEELYAKILKSGLLT 185
           AL   DEM++R Y PD++TYTEL+          RGFCIRG +  AEEL AK+ +SGL  
Sbjct: 503 ALRLYDEMLRRGYEPDIITYTELI----------RGFCIRGHVMEAEELLAKLQRSGLSI 552

Query: 186 DHVPVQILFNMYCKLEEPVVAFN 254
           DH P QIL   YC+   P  A++
Sbjct: 553 DHAPFQILIQKYCRTRVPGRAYD 575


>ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g24830 gi|22655280|gb|AAM98230.1| putative protein
           [Arabidopsis thaliana] gi|30725398|gb|AAP37721.1|
           At5g24830 [Arabidopsis thaliana]
           gi|332005984|gb|AED93367.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 593

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 25/111 (22%)
 Frame = +3

Query: 6   ALWFLDEMVQRRYRPDLMTYTELL-------------------------PDLITFTELLR 110
           A W  +EM   +  PD  TY  LL                         PD+IT+TEL+R
Sbjct: 459 AWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVR 518

Query: 111 GFCIRGDLKAAEELYAKILKSGLLTDHVPVQILFNMYCKLEEPVVAFNFYQ 263
           G C +G LK AE L ++I  +G+  DHVP  IL   Y +L+ P  A+  Y+
Sbjct: 519 GLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYK 569