BLASTX nr result

ID: Glycyrrhiza24_contig00026678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026678
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313440.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002298363.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002283992.1| PREDICTED: U-box domain-containing protein 1...    90   2e-16
ref|NP_190235.1| U-box domain-containing protein 13 [Arabidopsis...    88   8e-16
ref|XP_002877490.1| armadillo/beta-catenin repeat family protein...    88   8e-16

>ref|XP_002313440.1| predicted protein [Populus trichocarpa] gi|222849848|gb|EEE87395.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/67 (67%), Positives = 53/67 (79%)
 Frame = +1

Query: 1   PTLVELIINGSARNKENATSVLVHLCSGDPLHLSILSSHGVINPLLDLAENGSERGKRKA 180
           P LVE+I NGS RN+ENA +VLVHLCSGD  HL     HGV+ PL+DLA+NG++RGKRKA
Sbjct: 565 PVLVEVIRNGSPRNRENAAAVLVHLCSGDQKHLVEAQEHGVMGPLVDLAQNGTDRGKRKA 624

Query: 181 SQLLELI 201
            QLLE I
Sbjct: 625 QQLLERI 631


>ref|XP_002298363.1| predicted protein [Populus trichocarpa] gi|222845621|gb|EEE83168.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/67 (65%), Positives = 53/67 (79%)
 Frame = +1

Query: 1   PTLVELIINGSARNKENATSVLVHLCSGDPLHLSILSSHGVINPLLDLAENGSERGKRKA 180
           P LVE+I NGS RN+ENA +VLVHLCSGD  H+     HGV+ PL+DLA+NG++RGKRKA
Sbjct: 565 PVLVEVIRNGSPRNRENAAAVLVHLCSGDQKHMVEAQEHGVMGPLVDLAQNGTDRGKRKA 624

Query: 181 SQLLELI 201
            QLLE I
Sbjct: 625 QQLLERI 631


>ref|XP_002283992.1| PREDICTED: U-box domain-containing protein 13 [Vitis vinifera]
          Length = 682

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/68 (63%), Positives = 55/68 (80%)
 Frame = +1

Query: 1   PTLVELIINGSARNKENATSVLVHLCSGDPLHLSILSSHGVINPLLDLAENGSERGKRKA 180
           P LVE+I NGS RN+ENA +VLVHLC+GD  HL+     GV+ PL+DLA+NG++RGKRKA
Sbjct: 562 PVLVEVIGNGSPRNRENAAAVLVHLCAGDQHHLAEAQELGVMGPLVDLAQNGTDRGKRKA 621

Query: 181 SQLLELIG 204
           +QLLE +G
Sbjct: 622 AQLLERMG 629


>ref|NP_190235.1| U-box domain-containing protein 13 [Arabidopsis thaliana]
           gi|75266129|sp|Q9SNC6.1|PUB13_ARATH RecName: Full=U-box
           domain-containing protein 13; AltName: Full=Plant U-box
           protein 13 gi|6523054|emb|CAB62321.1| arm repeat
           containing protein homolog [Arabidopsis thaliana]
           gi|14596007|gb|AAK68731.1| arm repeat containing protein
           homolog [Arabidopsis thaliana]
           gi|22136270|gb|AAM91213.1| arm repeat containing protein
           homolog [Arabidopsis thaliana]
           gi|332644646|gb|AEE78167.1| U-box domain-containing
           protein 13 [Arabidopsis thaliana]
          Length = 660

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/67 (64%), Positives = 52/67 (77%)
 Frame = +1

Query: 1   PTLVELIINGSARNKENATSVLVHLCSGDPLHLSILSSHGVINPLLDLAENGSERGKRKA 180
           P+LVE I  GS RN+ENA +VLVHLCSGDP HL      G++ PL+DLA NG++RGKRKA
Sbjct: 561 PSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKA 620

Query: 181 SQLLELI 201
           +QLLE I
Sbjct: 621 AQLLERI 627


>ref|XP_002877490.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323328|gb|EFH53749.1|
           armadillo/beta-catenin repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 660

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/67 (64%), Positives = 52/67 (77%)
 Frame = +1

Query: 1   PTLVELIINGSARNKENATSVLVHLCSGDPLHLSILSSHGVINPLLDLAENGSERGKRKA 180
           P+LVE I  GS RN+ENA +VLVHLCSGDP HL      G++ PL+DLA NG++RGKRKA
Sbjct: 561 PSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKA 620

Query: 181 SQLLELI 201
           +QLLE I
Sbjct: 621 AQLLERI 627


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