BLASTX nr result

ID: Glycyrrhiza24_contig00026671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026671
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599502.1| F-box/WD-40 repeat-containing protein [Medic...   102   4e-20
ref|XP_003538059.1| PREDICTED: F-box/WD-40 repeat-containing pro...    99   4e-19
gb|ACU21521.1| unknown [Glycine max]                                   99   4e-19
gb|AFK49436.1| unknown [Lotus japonicus]                               87   1e-15
ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>ref|XP_003599502.1| F-box/WD-40 repeat-containing protein [Medicago truncatula]
           gi|355488550|gb|AES69753.1| F-box/WD-40
           repeat-containing protein [Medicago truncatula]
          Length = 438

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/81 (61%), Positives = 60/81 (74%)
 Frame = +1

Query: 1   SVVCKFWNAIVESRSLREFYDRKLKNXXXXXXXXXXXXXXKPLRVILGELAMEQHRLALR 180
           S+VCKFWN I+ESRSLR FY+RKL+N              K LR+IL ++AMEQHRLAL+
Sbjct: 48  SLVCKFWNEILESRSLRVFYERKLRNDASSSRSFEHTK--KSLRMILRDVAMEQHRLALQ 105

Query: 181 GGAFHVDQWRGHSTAVSQCRM 243
            G FHVDQW+GHST +SQCRM
Sbjct: 106 CGRFHVDQWKGHSTTISQCRM 126


>ref|XP_003538059.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
           [Glycine max]
          Length = 444

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/81 (61%), Positives = 58/81 (71%)
 Frame = +1

Query: 1   SVVCKFWNAIVESRSLREFYDRKLKNXXXXXXXXXXXXXXKPLRVILGELAMEQHRLALR 180
           S+VCK WNAIVESRSLREF +RK+                KPLRVILGE+AMEQH LAL+
Sbjct: 61  SLVCKLWNAIVESRSLREFCERKMHKSFAEFTK-------KPLRVILGEVAMEQHSLALQ 113

Query: 181 GGAFHVDQWRGHSTAVSQCRM 243
            G F+VDQW+ HST V+QCRM
Sbjct: 114 CGGFYVDQWKAHSTTVAQCRM 134


>gb|ACU21521.1| unknown [Glycine max]
          Length = 291

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/81 (61%), Positives = 58/81 (71%)
 Frame = +1

Query: 1   SVVCKFWNAIVESRSLREFYDRKLKNXXXXXXXXXXXXXXKPLRVILGELAMEQHRLALR 180
           S+VCK WNAIVESRSLREF +RK+                KPLRVILGE+AMEQH LAL+
Sbjct: 8   SLVCKLWNAIVESRSLREFCERKMHKSFAEFTK-------KPLRVILGEVAMEQHSLALQ 60

Query: 181 GGAFHVDQWRGHSTAVSQCRM 243
            G F+VDQW+ HST V+QCRM
Sbjct: 61  CGGFYVDQWKAHSTTVAQCRM 81


>gb|AFK49436.1| unknown [Lotus japonicus]
          Length = 259

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   SVVCKFWNAIVESRSLREFYDRKLKNXXXXXXXXXXXXXX--KPLRVILGELAMEQHRLA 174
           S+VCKFWN IV SR+LREFY+RK+ +                + L  +L  +AM QHRLA
Sbjct: 57  SLVCKFWNGIVWSRTLREFYERKVNDSSSSSSSFPSSSELNERTLGRVLRNVAMNQHRLA 116

Query: 175 LRGGAFHVDQWRGHSTAVSQCRM 243
           L+ G FHVD WRGHST V+QCRM
Sbjct: 117 LQKGVFHVDLWRGHSTRVAQCRM 139


>ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|222850467|gb|EEE88014.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/81 (39%), Positives = 42/81 (51%)
 Frame = +1

Query: 1   SVVCKFWNAIVESRSLREFYDRKLKNXXXXXXXXXXXXXXKPLRVILGELAMEQHRLALR 180
           S VCKFWN I++   L +    K +               + L V L ELA+E  R +L 
Sbjct: 47  SAVCKFWNEIIKRSKLLQLLYLKQQRRSSRSDFSE-----ESLNVYLEELAIEHQRQSLV 101

Query: 181 GGAFHVDQWRGHSTAVSQCRM 243
            G+ H+DQW+GHS  V QCRM
Sbjct: 102 QGSLHIDQWKGHSLGVDQCRM 122


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