BLASTX nr result
ID: Glycyrrhiza24_contig00026671
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00026671 (245 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003599502.1| F-box/WD-40 repeat-containing protein [Medic... 102 4e-20 ref|XP_003538059.1| PREDICTED: F-box/WD-40 repeat-containing pro... 99 4e-19 gb|ACU21521.1| unknown [Glycine max] 99 4e-19 gb|AFK49436.1| unknown [Lotus japonicus] 87 1e-15 ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|2... 60 1e-07 >ref|XP_003599502.1| F-box/WD-40 repeat-containing protein [Medicago truncatula] gi|355488550|gb|AES69753.1| F-box/WD-40 repeat-containing protein [Medicago truncatula] Length = 438 Score = 102 bits (253), Expect = 4e-20 Identities = 50/81 (61%), Positives = 60/81 (74%) Frame = +1 Query: 1 SVVCKFWNAIVESRSLREFYDRKLKNXXXXXXXXXXXXXXKPLRVILGELAMEQHRLALR 180 S+VCKFWN I+ESRSLR FY+RKL+N K LR+IL ++AMEQHRLAL+ Sbjct: 48 SLVCKFWNEILESRSLRVFYERKLRNDASSSRSFEHTK--KSLRMILRDVAMEQHRLALQ 105 Query: 181 GGAFHVDQWRGHSTAVSQCRM 243 G FHVDQW+GHST +SQCRM Sbjct: 106 CGRFHVDQWKGHSTTISQCRM 126 >ref|XP_003538059.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like [Glycine max] Length = 444 Score = 99.0 bits (245), Expect = 4e-19 Identities = 50/81 (61%), Positives = 58/81 (71%) Frame = +1 Query: 1 SVVCKFWNAIVESRSLREFYDRKLKNXXXXXXXXXXXXXXKPLRVILGELAMEQHRLALR 180 S+VCK WNAIVESRSLREF +RK+ KPLRVILGE+AMEQH LAL+ Sbjct: 61 SLVCKLWNAIVESRSLREFCERKMHKSFAEFTK-------KPLRVILGEVAMEQHSLALQ 113 Query: 181 GGAFHVDQWRGHSTAVSQCRM 243 G F+VDQW+ HST V+QCRM Sbjct: 114 CGGFYVDQWKAHSTTVAQCRM 134 >gb|ACU21521.1| unknown [Glycine max] Length = 291 Score = 99.0 bits (245), Expect = 4e-19 Identities = 50/81 (61%), Positives = 58/81 (71%) Frame = +1 Query: 1 SVVCKFWNAIVESRSLREFYDRKLKNXXXXXXXXXXXXXXKPLRVILGELAMEQHRLALR 180 S+VCK WNAIVESRSLREF +RK+ KPLRVILGE+AMEQH LAL+ Sbjct: 8 SLVCKLWNAIVESRSLREFCERKMHKSFAEFTK-------KPLRVILGEVAMEQHSLALQ 60 Query: 181 GGAFHVDQWRGHSTAVSQCRM 243 G F+VDQW+ HST V+QCRM Sbjct: 61 CGGFYVDQWKAHSTTVAQCRM 81 >gb|AFK49436.1| unknown [Lotus japonicus] Length = 259 Score = 87.0 bits (214), Expect = 1e-15 Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 2/83 (2%) Frame = +1 Query: 1 SVVCKFWNAIVESRSLREFYDRKLKNXXXXXXXXXXXXXX--KPLRVILGELAMEQHRLA 174 S+VCKFWN IV SR+LREFY+RK+ + + L +L +AM QHRLA Sbjct: 57 SLVCKFWNGIVWSRTLREFYERKVNDSSSSSSSFPSSSELNERTLGRVLRNVAMNQHRLA 116 Query: 175 LRGGAFHVDQWRGHSTAVSQCRM 243 L+ G FHVD WRGHST V+QCRM Sbjct: 117 LQKGVFHVDLWRGHSTRVAQCRM 139 >ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|222850467|gb|EEE88014.1| predicted protein [Populus trichocarpa] Length = 444 Score = 60.5 bits (145), Expect = 1e-07 Identities = 32/81 (39%), Positives = 42/81 (51%) Frame = +1 Query: 1 SVVCKFWNAIVESRSLREFYDRKLKNXXXXXXXXXXXXXXKPLRVILGELAMEQHRLALR 180 S VCKFWN I++ L + K + + L V L ELA+E R +L Sbjct: 47 SAVCKFWNEIIKRSKLLQLLYLKQQRRSSRSDFSE-----ESLNVYLEELAIEHQRQSLV 101 Query: 181 GGAFHVDQWRGHSTAVSQCRM 243 G+ H+DQW+GHS V QCRM Sbjct: 102 QGSLHIDQWKGHSLGVDQCRM 122