BLASTX nr result

ID: Glycyrrhiza24_contig00026670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026670
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537556.1| PREDICTED: uncharacterized protein LOC100802...   200   9e-50
ref|XP_003601886.1| Nucleoporin GLE1 [Medicago truncatula] gi|35...   148   4e-34
emb|CBI16818.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002282194.2| PREDICTED: uncharacterized protein LOC100245...   122   4e-26
ref|XP_002515056.1| Nucleoporin GLE1, putative [Ricinus communis...   113   1e-23

>ref|XP_003537556.1| PREDICTED: uncharacterized protein LOC100802744 [Glycine max]
          Length = 629

 Score =  200 bits (509), Expect = 9e-50
 Identities = 110/168 (65%), Positives = 132/168 (78%), Gaps = 4/168 (2%)
 Frame = -2

Query: 492 GAVKLEFRRCSQQRVDGIAADPEPDWSFDALVSELNALETKLATTPSST--KPSPLDKTM 319
           GAVKL  R CS QRVDG+AA+PEPDW+FD LVSELNALETKLAT  SS+  + SPLDK++
Sbjct: 3   GAVKLNLR-CSSQRVDGVAAEPEPDWTFDDLVSELNALETKLATNASSSTQRSSPLDKSI 61

Query: 318 LSRGNESKRGRTFVLRAHEFELDETDSEDGD--DNALVPAAAGIGKRFTCDELYLXXXXX 145
              G E +RGR FVLRA EF++++++S+D D  D ALV   +G  KRFTCDELYL     
Sbjct: 62  SKCGKEIQRGRAFVLRADEFDMEDSESDDDDHVDRALVVTDSG--KRFTCDELYLSDDDS 119

Query: 144 XXDVASAFQVQPYLMDEVGEVECSLIELTHEHQLRVKDEIRNKISALE 1
              +AS F+V+PYLMDE+GEVE +L+ELTHEHQLRVKDEIRNKISALE
Sbjct: 120 D--IASGFEVRPYLMDELGEVEGALLELTHEHQLRVKDEIRNKISALE 165


>ref|XP_003601886.1| Nucleoporin GLE1 [Medicago truncatula] gi|355490934|gb|AES72137.1|
           Nucleoporin GLE1 [Medicago truncatula]
          Length = 599

 Score =  148 bits (374), Expect = 4e-34
 Identities = 97/170 (57%), Positives = 112/170 (65%), Gaps = 5/170 (2%)
 Frame = -2

Query: 495 MGAVKLEFRRCSQQRVDGIAADPEPDWSFDALVSELNALETKLATTPSSTKPSPLDKTML 316
           MGA+KL      +   D IAA  +PDWSFDALVSELNALE  L+   SST P    +T  
Sbjct: 1   MGAMKL-----GRVDDDDIAA-ADPDWSFDALVSELNALENNLSAN-SSTPPLHFHQTTS 53

Query: 315 SRGN-----ESKRGRTFVLRAHEFELDETDSEDGDDNALVPAAAGIGKRFTCDELYLXXX 151
           SR N     E ++GR FV RA E+E   TDSED DD ALV   +  GK FTCDE+YL   
Sbjct: 54  SRVNLSGRKEIEKGRRFVFRAPEYE---TDSEDDDDKALV--VSDTGKHFTCDEIYLSDS 108

Query: 150 XXXXDVASAFQVQPYLMDEVGEVECSLIELTHEHQLRVKDEIRNKISALE 1
                V SA +VQPYLM++VGEVE +LIELTH+HQLRV D IRNKISALE
Sbjct: 109 DDSD-VESALEVQPYLMNKVGEVEGALIELTHDHQLRVNDGIRNKISALE 157


>emb|CBI16818.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  124 bits (310), Expect = 1e-26
 Identities = 80/167 (47%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
 Frame = -2

Query: 495 MGAVKLEFRRCSQQRVDGIAADPEPDWSFDALVSELNALETKLATTPSSTKPSPLDKTML 316
           MGAVKLE R C Q     IAADPEPDWSF+ALVSELN+LE KL    SS  P P  KT  
Sbjct: 40  MGAVKLELR-CPQNENGIIAADPEPDWSFEALVSELNSLELKL--NSSSIFPIPFTKTE- 95

Query: 315 SRG--NESKRGRTFVLRAHEFELDETDSEDGDDNALVPAAAGIGKRFTCDELYLXXXXXX 142
           SRG  N  K    FV+R  + E+++ + E G +  +   +   G RF CDELYL      
Sbjct: 96  SRGLSNVKKGPTAFVMRVSDDEMEDVEREGGVE-GVYDRSLVAGSRFACDELYLSDSDDE 154

Query: 141 XDVASAFQVQPYLMDEVGEVECSLIELTHEHQLRVKDEIRNKISALE 1
            ++   F    +LMD+ G  E +  ELTHEHQL VK+E+R +IS LE
Sbjct: 155 SNLHDQF----HLMDKAGVAEGAFFELTHEHQLAVKEEVRTQISVLE 197


>ref|XP_002282194.2| PREDICTED: uncharacterized protein LOC100245667 [Vitis vinifera]
          Length = 680

 Score =  122 bits (305), Expect = 4e-26
 Identities = 79/166 (47%), Positives = 98/166 (59%), Gaps = 2/166 (1%)
 Frame = -2

Query: 492 GAVKLEFRRCSQQRVDGIAADPEPDWSFDALVSELNALETKLATTPSSTKPSPLDKTMLS 313
           GAVKLE R C Q     IAADPEPDWSF+ALVSELN+LE KL    SS  P P  KT  S
Sbjct: 24  GAVKLELR-CPQNENGIIAADPEPDWSFEALVSELNSLELKL--NSSSIFPIPFTKTE-S 79

Query: 312 RG--NESKRGRTFVLRAHEFELDETDSEDGDDNALVPAAAGIGKRFTCDELYLXXXXXXX 139
           RG  N  K    FV+R  + E+++ + E G +  +   +   G RF CDELYL       
Sbjct: 80  RGLSNVKKGPTAFVMRVSDDEMEDVEREGGVE-GVYDRSLVAGSRFACDELYLSDSDDES 138

Query: 138 DVASAFQVQPYLMDEVGEVECSLIELTHEHQLRVKDEIRNKISALE 1
           ++   F    +LMD+ G  E +  ELTHEHQL VK+E+R +IS LE
Sbjct: 139 NLHDQF----HLMDKAGVAEGAFFELTHEHQLAVKEEVRTQISVLE 180


>ref|XP_002515056.1| Nucleoporin GLE1, putative [Ricinus communis]
           gi|223546107|gb|EEF47610.1| Nucleoporin GLE1, putative
           [Ricinus communis]
          Length = 613

 Score =  113 bits (283), Expect = 1e-23
 Identities = 72/164 (43%), Positives = 97/164 (59%)
 Frame = -2

Query: 492 GAVKLEFRRCSQQRVDGIAADPEPDWSFDALVSELNALETKLATTPSSTKPSPLDKTMLS 313
           GA KLE R    QRV+ +  DP PDWSFD+L+SEL++LE KL  + S+    P  KT+  
Sbjct: 4   GAFKLELR--CPQRVNEVGVDPNPDWSFDSLLSELSSLENKLNNSSSA----PFTKTLSR 57

Query: 312 RGNESKRGRTFVLRAHEFELDETDSEDGDDNALVPAAAGIGKRFTCDELYLXXXXXXXDV 133
           R       R FV+R  + E+++ DSE GDD      +  + KRF  D+++L         
Sbjct: 58  RSR-----RAFVMRVSDDEVEDNDSE-GDDEKDHTQSLVVAKRFNYDDIHLCDSDDSDY- 110

Query: 132 ASAFQVQPYLMDEVGEVECSLIELTHEHQLRVKDEIRNKISALE 1
            +      YLM++VG VE SL EL+ EHQL VK+EIRN+ISALE
Sbjct: 111 ENDLDSYSYLMEKVGLVESSLFELSQEHQLGVKEEIRNQISALE 154


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