BLASTX nr result

ID: Glycyrrhiza24_contig00026641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026641
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518543.1| PREDICTED: zinc finger CCCH domain-containin...   131   6e-29
ref|XP_003553014.1| PREDICTED: zinc finger CCCH domain-containin...   127   1e-27
ref|XP_003544688.1| PREDICTED: zinc finger CCCH domain-containin...   123   1e-26
ref|XP_003617718.1| Zinc finger CCCH domain-containing protein [...   123   1e-26
ref|XP_003532163.1| PREDICTED: zinc finger CCCH domain-containin...   120   1e-25

>ref|XP_003518543.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Glycine max]
          Length = 541

 Score =  131 bits (329), Expect = 6e-29
 Identities = 64/90 (71%), Positives = 72/90 (80%)
 Frame = +3

Query: 3   RIVFEKIQKFEPEHATKIIGYLLLQDHGEQEIVRLASCPDHFIREVAFKAKTDIQRLAVK 182
           RIVFEKIQKFEPEHA KIIGYL  Q HGEQE+ +LASCPD+FI EV  +AK ++QRLA K
Sbjct: 7   RIVFEKIQKFEPEHARKIIGYLFFQGHGEQEMAKLASCPDYFICEVVVQAKKELQRLAAK 66

Query: 183 SAMIPTPPSVNPQQGLSHFSVISPRTPASP 272
             M+P   +VNPQQGLS  SVISPRTP SP
Sbjct: 67  PDMLPISRTVNPQQGLSDLSVISPRTPTSP 96


>ref|XP_003553014.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Glycine max]
          Length = 552

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/99 (64%), Positives = 77/99 (77%), Gaps = 6/99 (6%)
 Frame = +3

Query: 3   RIVFEKIQKFEPEHATKIIGYLLLQDHGEQEIVRLASCPDHFIREVAFKAKTDIQRLAVK 182
           RIVF+K+Q+FEPEH TKIIGYLLLQDHGEQE+V+LAS PDH IR VA+KA+T++QRLA +
Sbjct: 8   RIVFDKLQRFEPEHTTKIIGYLLLQDHGEQEMVKLASLPDHLIRGVAYKARTELQRLAAR 67

Query: 183 SAMIPTPPSVNPQQGLSHFSVISPR------TPASPPSF 281
           SA+ P    +N QQ L+H SVISP       TP SP SF
Sbjct: 68  SAIQPISLPINSQQCLNHLSVISPTSVITPGTPTSPASF 106


>ref|XP_003544688.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Glycine max]
          Length = 547

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/89 (67%), Positives = 71/89 (79%)
 Frame = +3

Query: 6   IVFEKIQKFEPEHATKIIGYLLLQDHGEQEIVRLASCPDHFIREVAFKAKTDIQRLAVKS 185
           IVF+KIQKFEPE+A KIIGYL  Q HGEQE+ +LASCPD+FIREVA +A+ ++QRLA K 
Sbjct: 8   IVFDKIQKFEPENARKIIGYLFFQGHGEQEMAKLASCPDYFIREVAVQARKELQRLAAKP 67

Query: 186 AMIPTPPSVNPQQGLSHFSVISPRTPASP 272
            M+    +VNPQ GLS  SVISPRTP SP
Sbjct: 68  DMLAMSLTVNPQHGLSDLSVISPRTPTSP 96


>ref|XP_003617718.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355519053|gb|AET00677.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 547

 Score =  123 bits (309), Expect = 1e-26
 Identities = 63/88 (71%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   RIVFEKIQKFEPEHATKIIGYLLLQDHGEQEIVRLASCPDHFIREVAFKAKTDIQRLAVK 182
           RIVF+KIQKFEPE+A KIIGYLLLQD+GEQE+ RLASCPDH I EV FKA   +Q LAV 
Sbjct: 8   RIVFDKIQKFEPENARKIIGYLLLQDNGEQEMARLASCPDHIIGEVVFKA---LQMLAVN 64

Query: 183 SAMIP-TPPSVNPQQGLSHFSVISPRTP 263
           S M+P  PP+VNPQQGLSHF  +SP +P
Sbjct: 65  STMMPIPPPNVNPQQGLSHFPALSPSSP 92


>ref|XP_003532163.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Glycine max]
          Length = 555

 Score =  120 bits (300), Expect = 1e-25
 Identities = 58/90 (64%), Positives = 74/90 (82%)
 Frame = +3

Query: 3   RIVFEKIQKFEPEHATKIIGYLLLQDHGEQEIVRLASCPDHFIREVAFKAKTDIQRLAVK 182
           RIVF+K+ +FEPE+ATKIIGYLLLQDHGEQ++V+LAS PDH IR+VA+KA+T++QRLA +
Sbjct: 8   RIVFDKLHRFEPENATKIIGYLLLQDHGEQDMVKLASLPDHLIRDVAYKARTELQRLASR 67

Query: 183 SAMIPTPPSVNPQQGLSHFSVISPRTPASP 272
           SA+ P     N QQ LSH SVISP +  +P
Sbjct: 68  SAIQPISLPTNSQQCLSHLSVISPTSVITP 97


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