BLASTX nr result
ID: Glycyrrhiza24_contig00026641
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00026641 (284 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003518543.1| PREDICTED: zinc finger CCCH domain-containin... 131 6e-29 ref|XP_003553014.1| PREDICTED: zinc finger CCCH domain-containin... 127 1e-27 ref|XP_003544688.1| PREDICTED: zinc finger CCCH domain-containin... 123 1e-26 ref|XP_003617718.1| Zinc finger CCCH domain-containing protein [... 123 1e-26 ref|XP_003532163.1| PREDICTED: zinc finger CCCH domain-containin... 120 1e-25 >ref|XP_003518543.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] Length = 541 Score = 131 bits (329), Expect = 6e-29 Identities = 64/90 (71%), Positives = 72/90 (80%) Frame = +3 Query: 3 RIVFEKIQKFEPEHATKIIGYLLLQDHGEQEIVRLASCPDHFIREVAFKAKTDIQRLAVK 182 RIVFEKIQKFEPEHA KIIGYL Q HGEQE+ +LASCPD+FI EV +AK ++QRLA K Sbjct: 7 RIVFEKIQKFEPEHARKIIGYLFFQGHGEQEMAKLASCPDYFICEVVVQAKKELQRLAAK 66 Query: 183 SAMIPTPPSVNPQQGLSHFSVISPRTPASP 272 M+P +VNPQQGLS SVISPRTP SP Sbjct: 67 PDMLPISRTVNPQQGLSDLSVISPRTPTSP 96 >ref|XP_003553014.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] Length = 552 Score = 127 bits (318), Expect = 1e-27 Identities = 64/99 (64%), Positives = 77/99 (77%), Gaps = 6/99 (6%) Frame = +3 Query: 3 RIVFEKIQKFEPEHATKIIGYLLLQDHGEQEIVRLASCPDHFIREVAFKAKTDIQRLAVK 182 RIVF+K+Q+FEPEH TKIIGYLLLQDHGEQE+V+LAS PDH IR VA+KA+T++QRLA + Sbjct: 8 RIVFDKLQRFEPEHTTKIIGYLLLQDHGEQEMVKLASLPDHLIRGVAYKARTELQRLAAR 67 Query: 183 SAMIPTPPSVNPQQGLSHFSVISPR------TPASPPSF 281 SA+ P +N QQ L+H SVISP TP SP SF Sbjct: 68 SAIQPISLPINSQQCLNHLSVISPTSVITPGTPTSPASF 106 >ref|XP_003544688.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] Length = 547 Score = 123 bits (309), Expect = 1e-26 Identities = 60/89 (67%), Positives = 71/89 (79%) Frame = +3 Query: 6 IVFEKIQKFEPEHATKIIGYLLLQDHGEQEIVRLASCPDHFIREVAFKAKTDIQRLAVKS 185 IVF+KIQKFEPE+A KIIGYL Q HGEQE+ +LASCPD+FIREVA +A+ ++QRLA K Sbjct: 8 IVFDKIQKFEPENARKIIGYLFFQGHGEQEMAKLASCPDYFIREVAVQARKELQRLAAKP 67 Query: 186 AMIPTPPSVNPQQGLSHFSVISPRTPASP 272 M+ +VNPQ GLS SVISPRTP SP Sbjct: 68 DMLAMSLTVNPQHGLSDLSVISPRTPTSP 96 >ref|XP_003617718.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|355519053|gb|AET00677.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] Length = 547 Score = 123 bits (309), Expect = 1e-26 Identities = 63/88 (71%), Positives = 72/88 (81%), Gaps = 1/88 (1%) Frame = +3 Query: 3 RIVFEKIQKFEPEHATKIIGYLLLQDHGEQEIVRLASCPDHFIREVAFKAKTDIQRLAVK 182 RIVF+KIQKFEPE+A KIIGYLLLQD+GEQE+ RLASCPDH I EV FKA +Q LAV Sbjct: 8 RIVFDKIQKFEPENARKIIGYLLLQDNGEQEMARLASCPDHIIGEVVFKA---LQMLAVN 64 Query: 183 SAMIP-TPPSVNPQQGLSHFSVISPRTP 263 S M+P PP+VNPQQGLSHF +SP +P Sbjct: 65 STMMPIPPPNVNPQQGLSHFPALSPSSP 92 >ref|XP_003532163.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] Length = 555 Score = 120 bits (300), Expect = 1e-25 Identities = 58/90 (64%), Positives = 74/90 (82%) Frame = +3 Query: 3 RIVFEKIQKFEPEHATKIIGYLLLQDHGEQEIVRLASCPDHFIREVAFKAKTDIQRLAVK 182 RIVF+K+ +FEPE+ATKIIGYLLLQDHGEQ++V+LAS PDH IR+VA+KA+T++QRLA + Sbjct: 8 RIVFDKLHRFEPENATKIIGYLLLQDHGEQDMVKLASLPDHLIRDVAYKARTELQRLASR 67 Query: 183 SAMIPTPPSVNPQQGLSHFSVISPRTPASP 272 SA+ P N QQ LSH SVISP + +P Sbjct: 68 SAIQPISLPTNSQQCLSHLSVISPTSVITP 97