BLASTX nr result

ID: Glycyrrhiza24_contig00026632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026632
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544946.1| PREDICTED: ABC transporter B family member 2...   248   6e-64
ref|XP_003518353.1| PREDICTED: ABC transporter B family member 2...   238   6e-61
ref|XP_003616083.1| ABC superfamily ATP binding cassette transpo...   178   8e-43
dbj|BAJ34488.1| unnamed protein product [Thellungiella halophila]     129   5e-28
ref|XP_002319987.1| ABC transporter family of the mitochondria f...   129   5e-28

>ref|XP_003544946.1| PREDICTED: ABC transporter B family member 25, mitochondrial-like
           [Glycine max]
          Length = 750

 Score =  248 bits (634), Expect = 6e-64
 Identities = 152/234 (64%), Positives = 168/234 (71%), Gaps = 6/234 (2%)
 Frame = +1

Query: 1   AAAASASRHLLQRDASIPNIAG-GNRVRSLLSVSASAIT-PIRTTRGYGYNHGYGISFNS 174
           AAAASASRHLLQRDASI   +G GNRVRSLL+ SA   T PIR  + Y  ++GYGISFN+
Sbjct: 3   AAAASASRHLLQRDASIGACSGSGNRVRSLLTASAITTTYPIRIRKCY--SNGYGISFNN 60

Query: 175 RQPRTSPSLLFAIKGFLXXXXXXXXLHGRVTRPYLPVPQPSSTVDGRALFSTSAKTTDDG 354
            + RT PSLLFA+KGFL         HGRVTRPYLP P  SS VDGRALFSTS K TDDG
Sbjct: 61  PKHRTCPSLLFAVKGFLSDSSNSNSPHGRVTRPYLPHPVNSSNVDGRALFSTSTK-TDDG 119

Query: 355 SKNQK-TASTVAKSL---PPGEHVADVKIIRTLASYLWMKDNPEFRFRVVAALFLLVGAK 522
           S++QK  AST+ KS    PPG   ADVKI+ TLASYLWMKDN EFR R+VAAL LLVGAK
Sbjct: 120 SQSQKAAASTIGKSSPPPPPGGQAADVKILGTLASYLWMKDNLEFRVRIVAALGLLVGAK 179

Query: 523 VLNVQVPFLFKLAVDXXXXXXXXXXXXXXXXNPTMMALFGTPVAVLIGYGIARS 684
           +LNVQVPFLFKLAVD                N + + LF TPVAVLIGYGIARS
Sbjct: 180 ILNVQVPFLFKLAVD--SLTAGTGSMGALASNSSGLVLFATPVAVLIGYGIARS 231


>ref|XP_003518353.1| PREDICTED: ABC transporter B family member 25, mitochondrial-like
           [Glycine max]
          Length = 748

 Score =  238 bits (608), Expect = 6e-61
 Identities = 149/235 (63%), Positives = 163/235 (69%), Gaps = 7/235 (2%)
 Frame = +1

Query: 1   AAAASASRHLLQRDA-SIPNIAG-GNRVRSLLSVSASAITPIRTTRGYGYNHGYGISFNS 174
           AAAASASRHLLQRDA SI   +G GNRVRSLL+ SA     I TT    +   YGISFN+
Sbjct: 3   AAAASASRHLLQRDATSIGACSGSGNRVRSLLTASA-----ITTTYPIRFRKCYGISFNN 57

Query: 175 RQPRTSPSLLFAIKGFLXXXXXXXXLHGRVTRPYLPVPQPSSTVDGRALFSTSAKTTDDG 354
            + RT PSL  A+KGFL         HGRVTRPYLP P  SSTVDGRALFSTS KT DDG
Sbjct: 58  PKHRTCPSLFLAVKGFLSDSSNSNSPHGRVTRPYLPNPVTSSTVDGRALFSTSTKT-DDG 116

Query: 355 SKNQKTA--STVAKSLPP---GEHVADVKIIRTLASYLWMKDNPEFRFRVVAALFLLVGA 519
           S++QK A  ST+ KS PP   G   ADVKI+RTLASYLWMKDN EFR R+VAAL LLVGA
Sbjct: 117 SQSQKAAASSTIGKSSPPPPPGGQAADVKILRTLASYLWMKDNLEFRVRIVAALGLLVGA 176

Query: 520 KVLNVQVPFLFKLAVDXXXXXXXXXXXXXXXXNPTMMALFGTPVAVLIGYGIARS 684
           K+LNVQVPFLFKLAVD                N + +A F TPVAVLIGYGIARS
Sbjct: 177 KILNVQVPFLFKLAVD--SLTAATGSVGALASNSSGLAFFATPVAVLIGYGIARS 229


>ref|XP_003616083.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Medicago truncatula] gi|355517418|gb|AES99041.1| ABC
           superfamily ATP binding cassette transporter ABC protein
           [Medicago truncatula]
          Length = 1481

 Score =  178 bits (452), Expect = 8e-43
 Identities = 120/228 (52%), Positives = 139/228 (60%), Gaps = 3/228 (1%)
 Frame = +1

Query: 10  ASASRHLLQRDASIPNIAGGNRVRSLLSVSASAITP---IRTTRGYGYNHGYGISFNSRQ 180
           A+ASRH              NRVRSLL+  AS IT    I T+ G  Y++ Y    ++  
Sbjct: 3   AAASRHARYTPGR------NNRVRSLLN--ASGITTGYSIPTSNGISYSYSY----SNLN 50

Query: 181 PRTSPSLLFAIKGFLXXXXXXXXLHGRVTRPYLPVPQPSSTVDGRALFSTSAKTTDDGSK 360
            RTSPSLLF+IK FL         H R           S  VDGRALFSTSAKT +   +
Sbjct: 51  TRTSPSLLFSIKAFLSDPSSS---HNR-----------SLKVDGRALFSTSAKTDEGSQR 96

Query: 361 NQKTASTVAKSLPPGEHVADVKIIRTLASYLWMKDNPEFRFRVVAALFLLVGAKVLNVQV 540
           N+KT S VAKS P G   AD++I+++LA YLWMKDNPEFRFRVVAAL LLVGAKV+NVQV
Sbjct: 97  NKKTDSNVAKSPPGG---ADLRILKSLAGYLWMKDNPEFRFRVVAALCLLVGAKVVNVQV 153

Query: 541 PFLFKLAVDXXXXXXXXXXXXXXXXNPTMMALFGTPVAVLIGYGIARS 684
           PFLFKLAVD                +PT+M LF TP AVLIGYGIARS
Sbjct: 154 PFLFKLAVD--WLNTATGNAGLVASSPTVMTLFATPAAVLIGYGIARS 199



 Score =  176 bits (447), Expect = 3e-42
 Identities = 119/230 (51%), Positives = 141/230 (61%), Gaps = 5/230 (2%)
 Frame = +1

Query: 10   ASASRHLLQRDASIPNIAG-GNRVRSLLSVSASAITP---IRTTRGYGYNHGYGISFNSR 177
            A+ASR+      ++P  +G GNRV+SLL+  AS IT    I T   Y Y+H   IS+ +R
Sbjct: 752  AAASRY------AVPTTSGSGNRVQSLLT--ASCITTGHSIPTKSSYRYSHSNRISYINR 803

Query: 178  QPRTSPSLLFAIKGFLXXXXXXXXLHGRVTRPYLPVPQPSSTVDGRALFSTSAKTTDDGS 357
            Q R  PS +F+IK FL                       SS+ + RA FST     DDGS
Sbjct: 804  QFRPCPSSIFSIKCFLS--------------------NSSSSSNSRASFST-----DDGS 838

Query: 358  -KNQKTASTVAKSLPPGEHVADVKIIRTLASYLWMKDNPEFRFRVVAALFLLVGAKVLNV 534
             KNQKTAST+ KS P G  +AD+KI+++L SYLWMKDN EF+ RVVAA FLLVGAKVLNV
Sbjct: 839  LKNQKTASTITKSPPGGGQIADIKILKSLVSYLWMKDNLEFQLRVVAATFLLVGAKVLNV 898

Query: 535  QVPFLFKLAVDXXXXXXXXXXXXXXXXNPTMMALFGTPVAVLIGYGIARS 684
            QVPFLFKL VD                NPTMMALF TP+AVLIGYGIARS
Sbjct: 899  QVPFLFKLGVD--WLNTATGNASVVASNPTMMALFATPMAVLIGYGIARS 946


>dbj|BAJ34488.1| unnamed protein product [Thellungiella halophila]
          Length = 725

 Score =  129 bits (324), Expect = 5e-28
 Identities = 85/187 (45%), Positives = 105/187 (56%), Gaps = 6/187 (3%)
 Frame = +1

Query: 142 YNHGYGISFNSRQPRTSPSLLFAIKGFLXXXXXXXXLHGRVTRPYLPVP----QPSSTVD 309
           ++HG+         RTSP    AI  FL             + PY P P    Q S+ V+
Sbjct: 40  HHHGFSSFITRNSIRTSP----AINAFL-------------SDPY-PSPIRSVQRSAMVN 81

Query: 310 GRALFSTSAKTTDDGSKNQKTASTVAKSLPPGEHVADVKIIRTLASYLWMKDNPEFRFRV 489
           G A FSTS+  ++  +   K   TV+        +AD+KI+RTLA YLWM+DNPEFRFRV
Sbjct: 82  GSAQFSTSSPNSNQEATKSKQIKTVSSDSDSA--MADMKILRTLAGYLWMRDNPEFRFRV 139

Query: 490 VAALFLLVGAKVLNVQVPFLFKLAVD--XXXXXXXXXXXXXXXXNPTMMALFGTPVAVLI 663
           + AL  LVGAKVLNVQVPFLFKLAVD                  NP+++A F TP AVLI
Sbjct: 140 ITALGFLVGAKVLNVQVPFLFKLAVDWLASATGTGASMSTFMATNPSLVAAFATPSAVLI 199

Query: 664 GYGIARS 684
           GYGIAR+
Sbjct: 200 GYGIART 206


>ref|XP_002319987.1| ABC transporter family of the mitochondria family [Populus
           trichocarpa] gi|222858363|gb|EEE95910.1| ABC transporter
           family of the mitochondria family [Populus trichocarpa]
          Length = 762

 Score =  129 bits (324), Expect = 5e-28
 Identities = 79/145 (54%), Positives = 93/145 (64%), Gaps = 5/145 (3%)
 Frame = +1

Query: 265 TRPYLPVPQPSSTVDGRALFST-SAKTTDDGSKNQKTASTVAKSLP--PGEHVADVKIIR 435
           T P+ P   P+S ++G ALFST SA    DG  N+   S+ A +      + VAD KI+R
Sbjct: 102 TPPFRP---PNSVLNGHALFSTMSAPKDKDGVANKAPPSSSATTATNKSDQQVADTKILR 158

Query: 436 TLASYLWMKDNPEFRFRVVAALFLLVGAKVLNVQVPFLFKLAVD--XXXXXXXXXXXXXX 609
           TLASYLWM+DNPEFR RVV AL  LVGAKVLNVQVPFLFKLAVD                
Sbjct: 159 TLASYLWMEDNPEFRLRVVLALGFLVGAKVLNVQVPFLFKLAVDWLTTATSNAAALASFT 218

Query: 610 XXNPTMMALFGTPVAVLIGYGIARS 684
             N T++ALF TP +VLIGYGIAR+
Sbjct: 219 TANSTLLALFATPASVLIGYGIART 243


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